11/29/2019

11/10/2020

Peer reviewed

Alber, A., Morris, K.M., Bryson, K.J., Sutton, K., Monson, M.S., Chintoan-Uta, C., Borowska, D., Lamont, S.J., Schouler, C., Kaiser, P., Stevens, M., Vervelde, L. 2020. Avian pathogenic Escherichia coli (APEC) strain-dependent immunomodulation of respiratory granulocytes and mononuclear phagocytes in CSF1R-reporter transgenic chickens. Front. Immunol. https://doi.org/10.3389/fimmu.2019.03055

 

Bai H, He Y, Ding Y, Chang S, Zhang H, Chen J, Song J. Parent-of-origin has no detectable effect on survival days of Marek's disease virus infected White Leghorns. Poult Sci. 2019 98:4498-4503 doi: 10.3382/ps/pez209

 

Bai H, He Y, Ding Y, Chu Q, Lian L, Heifetz EM, Yang N, Cheng HH, Zhang H, Chen J, Song J. Genome-wide characterization of copy number variations in the host genome in genetic resistance to Marek's disease using next generation sequencing. BMC Genet. 2020 21:77. doi: 10.1186/s12863-020-00884-w.

 

Bai Y, Yuan, P., Zhang, H. Ramachandran, Yang, N. Song J. Adiponectin and its receptor genes expression in response to MDV infection of White, Leghorns. Poultry Science. doi: 10.1016/j.psj.2020.06.004

 

Bai, H.; He, Y.; Ding, Y.; Carrillo, J.A.; Selvaraj, R.K.; Zhang, H.; Chen, J.; Song, J. Allele-Specific Expression of CD4+ T Cells in Response to Marek’s Disease Virus Infection. Genes 2019, 10, 718. He Y, Han B, Ding Y, Zhang H, Chang S, Zhang L, Zhao C, Yang N, *Song J. Linc-GALMD1 Regulates Viral Gene Expression in the Chicken. Front Genet. 2019 10:1122. doi: 10.3389/fgene.2019.01122. eCollection 2019.

 

Beckstead RB, Anderson K and McDougald LR. 2020. Oviduct fluke (Prostagonimus macrorchis) found inside a chicken egg in North Carolina. Avian Diseases. 64: 352–353. https://doi.org/10.1637/aviandiseases-D-20-00021

 

Blakey, B. Crossley, A.P. Da Silva, D. Rejmanek, C. Jerry, R.A. Gallardo, S. Stoute. Infectious Bronchitis Virus Associated with Nephropathy in Diagnostic Cases from Commercial Broiler Chickens in California. Avian Diseases 2020 64:482-489 doi: 10.1637/0005-2086-64.4.482

 

Bolek, K., and K. Klasing. 2019. The effects of vaccination with keyhole limpet hemocyanin or oral administration of Salmonella enterica serovar Enteritidis on the growth performance of immunoglobulin knockout chickens. Poultry science 98(9):3504-3513.

 

Buttemer, W.A., B.A. Addison, and K.C. Klasing. 2020. The energy cost of feather replacement is not intrinsically inefficient. Journal of Zoology 98(2):142-148.

 

Calik A, Omara II, White MB, Evans NP, Karnezos TP, Dalloul RA. Dietary non-drug feed additive as an alternative for antibiotic growth promoters for broilers during a necrotic enteritis challenge. Microorganisms 7:257. 2019.

 

Calik A, Omara II, White MB, Li W, Dalloul RA. Effects of dietary direct fed microbial supplementation on performance, intestinal morphology and immune response of broiler chickens challenged with coccidiosis. Frontiers in Veterinary Science 6:463. 2019.

 

Chadwick EV, Beckstead RB. 2020. Two blackhead disease outbreaks in commercial turkey flocks were potentially exacerbated by poor poult quality and coccidiosis. Avian Diseases https://doi.org/10.1637/aviandiseases-D-20-00052

 

Chadwick EV, Malheiros RD, Beckstead RB. Early inoculation with Histomonas meleagridis has limited effects on broiler breeder growth and egg production and quality. Poultry Science  2020 Sep;99(9):4242-4248. doi: 10.1016/j.psj.2020.05.020

 

Chadwick EV, Rahimi S, Grimes J, Pitts J and Beckstead RB. 2020. Sodium bisulfate feed additive aids broilers in growth and intestinal health during a coccidiosis challenge. Poultry Science 99:5324-5330

 

Chanthavixay, G., Kern, C., Wang, Y., Saelao, P., Lamont, S.J., Gallardo, R.A., Rincon, G. and Zhou, H., 2020. Integrated Transcriptome and Histone Modification Analysis Reveals NDV Infection Under Heat Stress Affects Bursa Development and Proliferation in Susceptible Chicken Line. Frontiers in Genetics, 11, p.1176.

 

Chanthavixay, G., Kern, C., Wang, Y., Saelao, P., Lamont, S.J., Gallardo, R.A., Rincon, G., Zhou, H. 2020. Integrated transcriptome and histone modification analysis reveals NDV infection under heat stress affects bursa development and proliferation in susceptible chicken line. Front. Genet. 11:567812. doi: 10.3389/fgene.2020.567812

 

Chu, Q.; Ding, Y.; Cai, W.; Liu, L.; Zhang, H.; Song, J. Marek’s Disease Virus Infection Induced Mitochondria Changes in Chickens. Int. J. Mol. Sci. 2019, 20, 3150 doi: 10.3390/ijms20133150

 

da Silva, A., Schat, K. A., & Gallardo, R. A. (2019). Cytokine responses in tracheas from MHC congenic chicken lines with distinct susceptibilities to infectious bronchitis virus. Avian Diseases. 2020 64:36-45. doi: 10.1637/0005-2086-64.1.36.

 

da Silva, A.P., Aston, E.J., Chiwanga, G.H., Birakos, A., Muhairwa, A.P., Kayang, B.B., Kelly, T., Zhou, H. and Gallardo, R.A., 2020. Molecular Characterization of Newcastle Disease Viruses Isolated from Chickens in Tanzania and Ghana. Viruses, 12(9), p.916.

 

Deist, M. S., Gallardo, R. A., Dekkers, J., Zhou, H., & Lamont, S. J. (2020). Novel combined tissue transcriptome analysis after lentogenic Newcastle disease virus challenge in inbred chicken lines of differential resistance. Frontiers in Genetics, 11, http://review.frontiersin.org/review/506097/18/453015#/tab/History

 

Deist, M.S., Gallardo, R.A., Dekkers, J.C.M., Zhou, H. Lamont, S.J. 2020. Novel combined tissue transcriptome analysis after lentogenic Newcastle disease virus challenge in inbred chicken lines of differential resistance. Frontiers Genet. 11:11. doi: 10.3389/fgene.2020.00011

 

Del Vesco, A.P., Kaiser, M.G., Monson, M.S., Zhou, H., Lamont, S.J.. 2020. Genetic responses of inbred chicken lines illustrate importance of eIF2 family and immune-related genes in resistance to Newcastle disease virus. Scientific Reports 10:6155. https://doi.org/10.1038/s41598-020-63074-9

 

Downs, C.J., N.A. Dochtermann, R. Ball, K.C. Klasing, and L.B. Martin. 2020. The effects of body mass on immune cell concentrations. The American Naturalist 195(1):107-114.

 

Echeveryy H, Alizadeh M, Yitbarek A, Slominsky B, Rodriguez-Lecompte, JC. 2020. Immune Response of Chicken B cells to Yeast-derived products treated with Lytic Enzyme. In press British Poult. Sci. 21:1-6. doi: 10.1080/00071668.2020.1817328

 

Elad O, Uribe-Diaz S, Losada-Medina D, Yitbarek A, Sharif S and Rodriguez-Lecompte JC. 2020.Epigenetic effect of folic acid (FA) on the gene proximal promoter area and mRNA expression of chicken B-cell as antigen presenting cell. Br Poult Sci. 2020 14:1-9. doi: 10.1080/ 000 71668.2020.1799332

 

Emami NK, Calik A, White MB, Kimminau EA, Dalloul RA. Effects of probiotics and multi-component feed additives on microbiome, gut barrier and immune responses in broiler chickens during subclinical necrotic enteritis. Frontiers in Veterinary Science. 2020 https://doi.org/10.3389/fvets.2020.572142

 

Emami NK, Calik A, White MB, Young M, Dalloul RA. Necrotic enteritis: The role of tight junctions and mucosal immune responses in alleviating the effects of the disease. Microorganisms 7:231. 2019 doi: 10.3390/microorganisms7080231

 

Ferreira, H. L., Reilley, A. M., Goldenberg, D., Ortiz, I. R., Gallardo, R. A., & Suarez, D. L. (2020). Protection conferred by commercial NDV live attenuated and double recombinant HVT vaccines against virulent California 2018 Newcastle disease virus (NDV) in chickens. Vaccine, 38(34), 5507-5515.

 

Figueroa, T. Derksen, S. Biswas, A. Nazmi, D. Rejmanek, B. Crossley, P.Pandey, R.A. Gallardo. Persistence of LPAI and HPAI in Reused Poultry Litter, Effects of Litter Amendment Use and Composting Temperatures. J Appl. Poult. Res. 2020 in press

 

French, C. E., M. A. Sales, S. J. Rochell, A. Rodriguez, and G. F. Erf. 2020. Local and systemic inflammatory responses to lipopolysaccharide in broilers: new insights using a two-window approach. Poult. Sci. (in press).

 

Gallardo, R. A. Invited Review: Infectious bronchitis virus variants: Generation, Surveillance, Control and Prevention. Australian Journal of Veterinary Sciences. 2019. In press.

 

Gallardo, R. A., da Silva, A. P., & Rebollo, M. A. (2020). Effects of Amino acid-bound Zinc and Manganese Feed Additives on MHC Haplotype Chickens Challenged with Infectious Bronchitis Coronavirus. Avian Diseases. 2020 64:451-456. doi: 10.1637/aviandiseases-D-20-00031

 

Gallardo, R. A., Da Silva, A. P., Egaña-Labrin, S., Stoute, S., Kern, C., Zhou, H., ... & Corsiglia, C. (2020). Infectious Coryza: Persistence, Genotyping, and Vaccine Testing. Avian diseases, 64:157-165. https://www.aaapjournals.info/doi/abs/10.1637/aviandiseases-D-19-00184

 

Hassan, H.M., M. Mendoza, M. Rezvani, M. D. Koci, A. N. Dickey, and E. H. Scholl. 2020). Complete Genome Sequences of Lactobacillus strains, C25 and P38, Isolated from Chicken Cecum. Microbiol. Resour. Announc. Sep, 9 (39) e00501-20. DOI: 10.1128/MRA.00501-20.

 

Jaime J, Vargas-Bermúdez D.S., Yitbarek A., Reyes J, and Rodríguez-Lecompte JC. 2019. Differential immunomodulation effect of vitamin D (1,25 (OH)2 D3) on the innate immune response in different types of cells infected with IBDV. Poult. Sci. 99:4265-4277

 

Johnson, C.N., Hashim, M.M., Bailey, C.A., Byrd, J.A., Kogut, M.H., Arsenault, R.J. Feeding of yeast cell wall extracts during a necrotic enteritis challenge enhances cell growth/survival and immune signaling in the jejunum of broiler chickens. 2020. Poultry Science. 99, 2955-2966.

 

Kim, T.H., C. Kern, and H. Zhou. 2020. Knockout of IRF7 Highlights its Modulator Function of Host Response Against Avian Influenza Virus and the Involvement of MAPK and TOR Signaling Pathways in Chicken. Genes 11, 385; doi:10.3390/genes11040385

 

Krieter, A., N.P. Ponnuraj, and K.W. Jarosinski. 2020. Expression of the conserved herpesvirus protein kinase (CHPK) of Marek’s disease alphaherpesvirus in the skin reveals a mechanistic importance for CHPK during interindividual spread in chickens. J Virol. 94(5):e01522-19. https://doi.org/10.1128/JVI.01522-19

 

Liu L, Wang D, Mi S, Duan Z, Yang S, Song J, Xu G, Yang N, Yu Y. The different effects of viral and bacterial mimics maternal stimuli on ethology of hens and reproduction of their offspring. Poult Sci. 2019 98:4153-4160 doi: 10.3382/ps/pez189

 

Losada-Medina D, Yitbarek A, Uribe-Diaz S, Ahmed M and Rodríguez-Lecompte JC. 2020. Identification, tissue characterization and innate immune role of Angiogenin-4 expression in young broiler chickens. Poult. Sci. 99:2992-3000

 

Mon, K.Z., Y. Zhu, G. Chanthavixay, C. Kern and H. Zhou. 2020. Integrative analysis of gut microbiome and metabolites revealed novel mechanisms of intestinal Salmonella carriage in chicken. Sci Rep. 10:4809. www.nature.com/articles/s41598-020-60892-9

 

Mushi, G. Chiwanga, E. Amuzu-Aweh, M. Walugembe, R. Max, S.J. Lamont, T. Kelly, E. Mollel, P. Msoffe, J. Dekkers, R. A. Gallardo, H. Zhou, A. Muhairwa. Phenotypic variability and population structure analysis of Tanzanian free range local chickens. BMC Veterinary Research 16, 360 (2020). https://doi.org/10.1186/s12917-020-02541-x

 

Neerukonda SN, Katneni UK, Bhandari N, Parcells MS. Transcriptional Analyses of Innate and Acquired Immune Patterning Elicited by Marek's Disease Virus Vaccine Strains: Turkey Herpesvirus (HVT), Marek's Disease Virus 2 (strain SB1), and Bivalent Vaccines (HVT/SB1 and HVT-LT/SB1). Avian Dis. 2019 Dec;63(4):670-680. doi: 10.1637/aviandiseases-D-19-00117. PMID: 31865682.

 

Oxford, J. H., & Selvaraj, R. K. (n.d.). Effects of Glutamine Supplementation on Broiler Performance and Intestinal Immune Parameters During an Experimental Coccidiosis Infection. The Journal of Applied Poultry Research. doi:10.3382/japr/pfz095

 

Perry, F., Johnson, C.N., Aylward, B.A., Arsenault, R.J. The Differential Phosphorylation-Dependent Signaling and Glucose Immunometabolic Responses Induced during Infection by Salmonella Enteritidis and Salmonella Heidelberg in Chicken Macrophage-like cells. 2020. Microorganisms. 8(7), 1041.

 

Ponnuraj, N.P., Y.T. Tien, W. Vega Rodriguez, A. Krieter, and K.W. Jarosinski. 2019. The Herpesviridae conserved multifunctional infected cell protein 27 (ICP27) is important, but not required for replication and oncogenicity of Marek’s disease alphaherpesvirus (MDV). J Virol. 93(4); e01903-18. https://doi.org/10.1128/jvi.01903-18

 

Redweik, G.A.J., Kogut, M.H., Arsenault, R.J., and Mellata, M. Oral Treatment with Ileal Spores Triggers Immunometabolic Shifts in Chicken Gut. 2020. Frontiers in Veterinary Science. 7 (629) https://doi.org/10.3389/fvets.2020.00629.

 

Selvaraj, R., Markazi, A., Shanmugasundaram, R., Murugesan, R., & Mohnl, M. (2019). Effects of acidifier supplementation in laying hens challenged with Salmonella. Journal of Applied Poultry Research, 28, 919-929

 

Selvaraj, R., Renu, S., Markazi, A., dhakal, S., Shanmugasundaram, R., & Gourapura, R. (2019). Oral deliverable mucoadhesive chitosan-Salmonella subunit nanovaccine for layer chickens. International Journal of Nanomedicine 2020; 15: 761–777

 

Selvaraj, R., Shanmugasundaram, R., Markazi, A., Mortada, M., Bielke, L., Applegate, T., & Murugesan, R. Effect of Synbiotic Supplementation on Caecal Clostridium perfringens load in Broiler Chickens with different Necrotic Enteritis Challenge Models. Poult. Sci. 99, 2020, 2452-2458

 

Shanmugasundaram, R., Morris, A., & Selvaraj, R. (2019). Effect of 25-hydroxycholecalciferol supplementation on turkey performance and immune cell parameters in a coccidial infection model. Poultry Science, 98, 1127-1133. Retrieved from http://dx.doi.org/10.3382/ps/pey480

 

Shanmugasundaram, R., Mortada, M., Cosby, D. E., Singh, M., Applegate, T. J., Syed, B., Selvaraj, R. K. (2019). Synbiotic supplementation to decrease Salmonella colonization in the intestine and carcass contamination in broiler birds.. PloS one, 14(10), e0223577. doi:10.1371/journal.pone.0223577

 

Swaggerty,C.L., Arsenault, R.J., Johnson, C., Piva, A., and Grilli, E. Dietary supplementation with a microencapsulated blend of organic acids and botanicals alters the kinome in the ileum and jejunum to enhance growth and feed efficiency in broilers. 2020. PLOS One. 15(7), e0236950.

 

Talghari M, Behnamifar A, Rahimi S, Torshizi MAK, Beckstead RB, Grimes JL. The effect of sodium bisulfate and coccidiostat on intestinal lesions and growth performance of Eimeria spp. challenged broilers. Poultry Science. 99:4769-4775

 

Taylor, R. L., Jr. 2020.  A Year of Change. Poult. Sci. 99:6291–6292 https://doi.org/10.1016/j.psj.2020.09.018

 

Uribe-Diaz S, A. Yitbarek A, Vallejo D, Losada-Medina D, Ahmed M and Rodríguez-Lecompte 2020. Effect of folic acid on the innate immune receptors in chicken B cells infected with IBDV. Veterinary Immunology and Immunopathology in press

 

Vega-Rodriguez, W., Ponnuraj, N.P., and K.W. Jarosinski. 2019. Marek’s disease alphaherpesvirus (MDV) RLORF4 is not required for expression of glycoprotein C and interindividual spread. Virology 534:108-113. https://doi.org/10.1016/j.virol.2019.06.008

 

Walugembe, M., Amuzu-Aweh,E.N., Botchway, P.K., Naazie, A., Aning, G., Wang, Y., Saelao, P., Kelly, T., Gallardo, R.A., Zhou, H., Lamont, S.J., Kayang, B., Dekkers, J. 2020. Genetic Basis of Response of Ghanaian Local Chickens to Infection with a Lentogenic Newcastle Disease Virus, Frontiers Genetics https://doi.org/10.3389/fgene.2020.00739

 

Wang, Y., Saelao, P., Kern, C., Jin, S., Gallardo, R.A., Kelly, T., Dekkers, J.M., Lamont, S.J. and Zhou, H., 2020. Liver Transcriptome Responses to Heat Stress and Newcastle Disease Virus Infection in Genetically Distinct Chicken Inbred Lines. Genes, 11(9), p.1067.

 

Wang, Y., Saelao, P., Kern, C., Jin, S., Gallardo, R.A., Kelly, T., Dekkers, J.M., Lamont, S.J., Zhou, H. 2020. Liver transcriptome responses to heat stress and Newcastle Disease virus infection in genetically distinct chicken inbred lines. Genes 11, 1067; doi:10.3390/genes11091067

 

Ward, T.L., Weber, B.P., Mendoza, K.M., Danzeisen, J.L., Llop, K., Lang, K., Clayton, J.B., Grace, E., Brannon, J., Radovic, I., Beauclaire, M., Heisel, T.J., Knights, D., Cardona, C., Kogut, M., Johnson, C., Noll, S.L., Arsenault, R., Reed, K.M., and Johnson, T.J. Antibiotics and host-tailored probiotics similarly modulate effects on the developing avian microbiome, mycobiome, and host gene expression. 2019. mBio. 10(5), 02171-19

 

Wilkinson, N. G., R. T. Kopulos, L. M. Yates, W. E. Briles, and R. L. Taylor, Jr. 2020.  Major histocompatibility (B) complex recombinant R13 antibody response against bovine red blood cells. Poult. Sci. 99:4804-4808 https://doi.org/10.1016/j.psj.2020.06.069

 

You Z, Zhang Q, Liu C, Song J, Yang N, Lian L. Integrated analysis of lncRNA and mRNA repertoires in Marek's disease infected spleens identifies genes relevant to resistance. BMC Genomics. 2019 Mar 28;20(1):245. doi: 10.1186/s12864-019-5625-1.

 

Zhang, J. R. M. Goto and M. M. Miller.  2020.  A simple means for MHC-Y genotyping in chickens using short tandem repeat sequences.  Immunogenetics 72(5):325-332. doi: 10.1007/s00251-020-01166-6.

 

Zhang, J., Kaiser, M. G., Gallardo, R. A., Kelly, T. R., Dekkers, J., Zhou, H., & Lamont, S. J. (2020). Transcriptome analysis reveals inhibitory effects of lentogenic Newcastle disease virus on cell survival and immune function in spleen of commercial layer chicks. Genes, 11(9), 1003.

 

Zhang, J., Kaiser, M.G., Gallardo, R.A., Kelly, T. R., Dekkers, J.C.M., Zhou, H., Lamont, S.J. 2020. Transcriptome analysis reveals inhibitory effects of lentogenic Newcastle disease virus on cell survival and immune function in spleen of commercial layer chicks. Genes 11:1003; doi:10.3390/genes11091003

 

Non-peer reviewed, rapid communication

Quinlan, B. D., H. Mou, L. Zhang, Y. Guo, W. He, A. Ojha, M. S. Parcells, G. Luo, W. Li, G. Zhong, H. Choe, and M. Farzan,, The SARS-CoV-2 Receptor-Binding Domain Elicits a Potent Neutralizing Response Without Antibody-Dependent Enhancement. doi: https://doi.org/10.1101/2020.04.10.036418

 

Published Abstracts

Arsenault, R.J. Immunometabolism: The Potential Cause of and Solution to our Most Pressing Poultry Problems in Health and Infectious Disease. Proceedings of the 2020 Animal Nutrition Conference of Canada. 2020. Animal Nutrition Association of Canada, Ottawa, Canada, pp 68-74

 

Arsenault, R.J. The Immunometabolic Responses of Heritage and Modern Broilers to Immune Challenge: Learning From the Past to Inform the Future. Symposium on Gut Health in Production of Food Animals; 2019 November 4-6; St. Louis, MO.

 

Boothe SM, Emami NK, White MB, Dalloul RA. In-house hatching and early feeding to improve chick performance during a necrotic enteritis challenge. International Poultry Scientific Forum (IPSF), SPSS and SCAD. Atlanta, GA. 2020.

 

Çalik A, Emami NK, White MB, Dalloul RA. The impact of dietary vitamin E and selenium on body composition, intestinal integrity and immunity of broilers subjected to heat stress. International Poultry Scientific Forum (IPSF), SPSS and SCAD. Atlanta, GA. 2020.

 

Chadwick, Elle Jesse Grimes, Shaban Rahimi, John Pitts, and Robert Beckstead Sodium bisulfate aids broilers in growth and intestinal health during a coccidiosis challenge. International Poultry Scientific Forum (IPSF), SPSS and SCAD. Atlanta, GA. 2020

 

Chadwick, Elle, Robert Beckstead. Dietary additives, coccidiosis and Fenbendazole treatment alter fecal moisture to various degrees in turkey poults. Poultry Science Association Annual Meeting, 2020

 

Chasser, Kaylin, Audrey F. Duff, Whitney Briggs, Kate McGovern, Johel Bielke, Lisa Bielke. Day of hatch exposure to Enterobacteriaceae and characterization of avian pathogenic E. coli on inflammation. Poultry Science Association Virtual Conference, July 2020.

 

Chasser, Kaylin, Kate McGovern, Audrey F. Duff, B D. Graham, Whitney Briggs, Denise Russi Rodrigues, Johel Bielke, and Lisa Bielke. Effect of day of hatch inoculation with Gram-negative bacteria on gastrointestinal inflammation. International Poultry Scientific Forum (IPSF), SPSS and SCAD. Atlanta, GA. 2020.

 

Cox, J. L., D. R. Rodrigues, A. F. Duff, K. M. Chasser, J. C. Bielke, D. Jeffrey, C. Risch, D. Shafer, L. R. Bielke. Characterization of intestinal microbiota of newly hatched ducklings. International Poultry Scientific Forum (IPSF), SPSS and SCAD. Atlanta, GA. 2020.

 

Cueva, Justin R., Nicholas Egan, Imane Assakhi, Phaedra Tavlarides-Hontz, and Mark S. Parcells. Sequential Interactions of Meq Proteins with Polycomb Repressive Complex Proteins in Marek’s Disease Virus Latency. Proceedings of the 92nd NECAD, Penn State University, September 15, 2020

 

Cupo, Katherine Catherine Fudge, Kelly Keen, and Robert Beckstead Development of a diagnostic PCR specific to the Cochlosoma anatis 28S ribosomal gene. International Poultry Scientific Forum (IPSF), SPSS and SCAD. Atlanta, GA. 2020

 

Dallakoti, Aksana, Eric Munoz, Matthew D. Huson, Shannon Modla and Mark S. Parcells. The Role of Exosomes in Marek’s Disease Virus Vaccine Responses. Proceedings of the 92nd NECAD, Penn State University, September 15, 2020

 

Drechsler Y, and Hawkins D. 2020. Infectious Bronchitis Virus Infection Affects Chromatin Accessibility and RNA Differential Expression in a Tissue-Specific Manner. Plant & Animal Genome XXVIII, San Diego, CA.

 

Duff, Audrey F., K. M. Chasser, W. N. Briggs, D. Russi-Rodrigues, L. R. Bielke. Age-Related Changes in Gut Permeability and Optimal Timing for Experimentally Induced Leaky Gut. International Poultry Scientific Forum (IPSF), SPSS and SCAD. Atlanta, GA. 2020.

 

Duff, Audrey F., Kaylin Chasser, Whitney Briggs, Johel Bielke, Shelby Ramirez, Antonia Tacconi, G. R. Murugesan, Lisa Bielke. Necrotic enteritis model to achieve mortality reflective of industry. Poultry Science Association Virtual Conference, July 2020

 

Emami NK, Boothe SM, White MB, Dalloul RA. Effects of a naturally occurring necrotic enteritis challenge on performance, lesion scores, and expression of tight junction proteins in broiler chickens. International Poultry Scientific Forum (IPSF), SPSS and SCAD. Atlanta, GA. 2020.

 

Erf, G. F., G. Le Pape, S. Rémy, and C. Denesvre. 2020. Vitiligo onset favors earlier HVT replication in feathers of Smyth chickens. 13th International Symposium on Marek’s disease and avian herpesviruses, June 14-17, 2020, Guelph, Ontario, Canada (in press).

 

Gogineni, Vivek, Huawei Wang, Kyle Moskowitz, Prasad Dhurjati, Joshua Miller, Benedikt Kaufer, and Mark S. Parcells. Agent-based Modeling of Marek’s Disease Virus Lytic Infection. 92nd Annual Northeastern Conference on Avian Diseases (NECAD) Penn State, virtual, Sept. 15 and 16, 2020.

 

Hawkins D. and Drechsler Y. 2020. Epigenomic annotation of candidate cis-regulatory elements in the chicken genome. Plant & Animal Genome XXVIII, San Diego, CA.

 

Koci, M. D., A. Ballou, X. Wei, L. Zhang, Z. Q. Liew, and R. Ali. 2020. Connecting the microbiome to host metabolites: understanding how the microbiome controls immune activity in birds. Experimental Biology 2020. San Diego, CA.

 

McGovern, Kate, K.M.Chasser, A.F.Duff, W.N.Briggs, D.R. Rodrigues, L.R.Bielke. Effect of Select Gram Negative Bacteria on Alpha-1-Acid-Glycoprotein and Ileal Histology. International Poultry Scientific Forum (IPSF), SPSS and SCAD. Atlanta, GA. 2020.

 

Miller, Joshua, Kyle Moskowitz, Samuel Keating, Abhyudai Singh, Prasad Dhurjati, Andelé Conradie, Benedikt B. Kaufer, Phaedra Travlarides-Hontz, Mark Parcells. The Development of Agent-based and Mathematical Models for Marek’s disease virus (MDV) Lytic and Latent Infections. Proceedings of the 92nd NECAD, Penn State University, September 15, 2020

 

Miller, M. M., J. Zhang, R. M. Goto, C. F. Honaker, P. B. Siegel, R. L. Taylor, Jr., and H. K. Parmentier. 2020.  Major advances in defining variability and function of chicken MHC-Y region genes. PAG XXVII https://plan.core-apps.com/pag_2020/abstract/66376fdb-aa85-4703-a8d0-b3a4372e75f2

 

Patria, Joseph, Nirajan Bhandari, Phaedra Travlarides-Hontz, Andelé Conradie, Benedikt B. Kaufer, and Mark S. Parcells. Mutations in the Meq oncoprotein of MDV may be selected based on innate immune and latent T-cell interactomes. Proceedings of the 92nd NECAD, Penn State University, September 15, 2020.

 

Rodrigues, D. R., J. L. Cox, A. Hysong, W. Briggs, A. Duff, K. Chasser, J. Bielke, K. Wilson, C. Risch, D. Jeffrey, D. Shafer, and L.Bielke. Strategies to manipulate early-life microbiota of poultry toward beneficial bacterial growth. International Poultry Scientific Forum (IPSF), SPSS and SCAD. Atlanta, GA. 2020.

 

Rodríguez-Lecompte JC, Jaime J, Vargas-Bermúdez DS, Yitbarek A , and Reyes J. 2019. Susceptibility and characterization of anti-viral innate immune responses in chicken B cells infected with infectious bursa diseases virus and supplemented with 1,25(OH)2 D3. AVMA Convention-AAAP, Washington, DC, August 2-6, 2019.

 

Rodríguez-Lecompte JC, Jaime J, Vargas-Bermúdez DS, Yitbarek A , and Reyes J. 2019. Effect of 1,25(OH)2 D3 on gene mRNA expression of innate immune toll-like receptors, proteins signal adapters, RIGI-like receptor, IFN type I, IFN-induced proteins, and proinflammatory cytokines on chicken fibroblast infected with IBDV. The Western Poultry Disease Conference-Association of Poultry Science Specialists (ANECA). Puerto Vallarta, Mexico, April 2-6, 2019.

 

Rodríguez-Lecompte JC, Jaime J, Vargas-Bermúdez DS, YitbarekA , and Reyes J. 2019. Chicken macrophages’ susceptibility and innate immune response to infectious bursal disease virus with the supplementation of 1,25(OH)2 D3. International Poultry Scientific Forum (IPSF), SPSS and SCAD. Atlanta, GA, February 11-14, 2019.

 

Rodríguez-Lecompte JC, Uribe-Diaz S, Martinez-Morales BC, Despres B, and J. Reyes. 2019. Pre- and post-challenge effects of essential oils (EO) on mRNA expression of antiviral and pro-inflammatory pathways genes on chicken macrophages infected with IBDV. International Poultry Scientific Forum (IPSF), SPSS and SCAD. Atlanta, GA, January 28-30, 2020.

 

Sigmon, Christina S., Alessandro Ferrarini, Robert Beckstead. The use of a direct ELISA to identify Blackhead resistant turkeys. Poultry Science Association Annual Meeting, 2020

 

Taylor, R. L., Jr., W. Drobik-Czwarno, and J. E. Fulton. 2020. Candidate gene for chicken alloantigen A. Poult. Sci. 99(E-Suppl. 1):45-46

 

Tracy, K., R. A. Gallardo, E. Aston, and H. Zhou. 2020. Role of Humoral Immunity in Clearance of Lentogenic Newcastle Disease Virus in Chickens. Plant & Animal Genome XXVIII, San Diego, CA.

 

Uribe-Diaz S, Pirateque JF, Despres B, Reyes J, and Rodríguez-Lecompte JC. 2019. Effect of essential oils (EO) on mRNA expression of antiviral and pro-inflammatory innate immunity genes on chicken macrophages infected with IBDV. PSA annual meeting. Montreal, QC, Canada, July 15-18, 2019.

 

Uribe-Diaz S, Yitbarek A, Vallejo D, Losada-Medina D, Ahmed M, and Rodríguez-Lecompte JC. 2020. Role of folic acid on the antiviral innate immune pathways in chicken B-lymphocytes infected with IBDV. PSA annual meeting. Online, July 15-18, 2020.

 

Uribe-Diaz S, Yitbarek A, Vallejo D, Losada-Medina D, Ahmed M, and Rodríguez-Lecompte JC. 2019. Effect of folic acid on the innate immune receptors in chicken B-lymphocytes infected with IBDV. International Poultry Scientific Forum (IPSF), SPSS and SCAD. Atlanta, GA, January 28-30, 2020.

 

Vignale-Pollock, Karen, Elle Chadwick, and Robert Beckstead. The effect of feeding encapsulated butyric acid and zinc on disease signs of turkeys challenged with histomonas meleagridis and coccidia. International Poultry Scientific Forum (IPSF), SPSS and SCAD. Atlanta, GA. 2020.

 

Wang Y., Chanthavixay K., C. Kern, Saelao, P., R. Gallardo, S.J. Lamont. N. Chubb, G. Rincon, Zhou, H. 2020. Identification of Active Promoters and Enhancers By H3K27ac Peaks in the Spleen Tissue of Two Inbred Chicken Lines Under NDV Infection and Heat Stress. Plant & Animal Genome XXVIII, San Diego, CA.

 

White MB, Boothe SM, Dalloul RA. Broiler response to a necrotic enteritis challenge after varying in ovo doses of commercial probiotics. International Poultry Scientific Forum (IPSF), SPSS and SCAD. Atlanta, GA. 2020.

 

Wisser-Parker, Kristy, Kristen Wooten, Phaedra Talverides-Hontz, and Mark S. Parcells. Assessment of the Role of IRG1 and Itaconate on Marek’s diseases virus (MDV) Infection. Proceedings of the 92nd NECAD, Penn State University, September 15, 2020

 

Undergraduate Research Symposium:

Gogineni, Vivek, Huawei Wang, Kyle Moskowitz, Prasad Dhurjati, Joshua Miller, Benedikt Kaufer, and Mark S. Parcells. Agent-based Modeling of Marek’s Disease Virus Infection of Chicken Embryo Fibroblasts (CEF). University of Delaware Undergraduate Research Symposium August 13, 2020

 

Wang, Huawei, Vivek Gogineni, Kyle Moskowitz, Prasad Dhurjati, Joshua Miller, Benedikt Kaufer, and Mark S. Parcells. Agent-based Modeling of Marek’s Disease Virus Reactivation from Latency. University of Delaware Undergraduate Research Symposium August 13, 2020

 

Book Chapters:

Cheng, H.H. and Lamont, S.J. 2020. Genetics of disease resistance. pp. 90-108. In: Diseases of Poultry. 14th ed. D.E. Swayne, M. Boulianne, C.M. Logue, L.R. McDougald, V. Nair, and D.L. Suarez, Eds. Wiley-Blackwell, Hoboken

 

Erf, G. F. Autoimmune diseases of poultry. in: Avian Immunology, Schat, K. A., Kaspers B. and, P. Kaiser, editors. Elsevier, Academic Press, San Diego, CA. 3rd edition of Avian Immunology in press.

 

Klasing, K.C., and D.R. Korver. 2020. Nutritional diseases. pp. 1255-1285. In: Diseases of Poultry. 14th ed. D.E. Swayne, M. Boulianne, C.M. Logue, L.R. McDougald, V. Nair, and D.L. Suarez, Eds. Wiley-Blackwell, Hoboken

 

Pinard-van der Laan, M.-H., J. Kaufman, A. Psifidi, H. Zhou, M. Fife. 2020. Genetics and genomics of immunity and disease traits in poultry species. In S. E. Aggrey, H. Zhou, M. Tixier-Boichard and D. D. Rhoads (Eds). 2020 Advances in poultry genetics and genomics. Burleigh Dodds Science Publishing ISBN:978-1-78676-324.

 

6.3 Thesis/Dissertation

Aylward, Bridget. A Comparative Evaluation of the Gastrointestinal Immune Response of the Modern and Heritage Broiler Chicken. Ph.D. Dissertation. 2020. University of Delaware. Supervisor: Ryan J. Arsenault

 

Boothe, Siobhan M.  In-house hatching and early feeding to improve chick performance during a necrotic enteritis challenge.  MS Thesis, Virginia Tech. Supervisor: Rami A. Dalloul

 

Briggs, Whitney. Evaluation and optimization of quantitative analysis methods for C. perfringens detection in broiler intestinal samples to use with necrotic enteritis challenge models. M. S. thesis, 2020. Ohio State University. Supervisor: Lisa R. Bielke

 

Chadwick, Elle. The role of poultry parasites in gut health and production. PhD Dissertation, 2020. North Carolina State University. Supervisor: Robert B. Beckstead

 

Cox, Jeremiah. Characterization of intestinal microbiota of newly hatched ducklings. Undergraduate research thesis, 2020. Ohio State University. Supervisor: Lisa R. Bielke https://kb.osu.edu/handle/1811/91796

 

Ellington, C. Effects of dietary copper, zinc and manganese source and level on the acute inflammatory response of broilers. MS Thesis, 2019. University of Arkansas, Fayetteville Supervisor: G. F. Erf

 

Tracy, Karen. The systemic immune response to Newcastle disease virus infection in chickens. PhD Dissertation, 2020. University of California-Davis. Supervisor: Rodrigo A. Gallardo

 

Emami, Nima K.  Managing poultry gut integrity, immunity and microbial balance during necrotic enteritis.  PhD Dissertation. 2020 Virginia Tech. Supervisor: Rami A. Dalloul

11/18/2021

Peer Reviewed Papers

Akerele, G., N. Ramadan, S. Renu, R. Shanmugasundaram, G.J. Renukaradhya, and R.K. Selvaraj. 2020. In vitro characterization and Immunogenicity of chitosan nanoparticles loaded with native and inactivated extracellular proteins from a field strain of Clostridium perfringens associated with necrotic enteritis. Veterinary Immunology and Immunopathology 224:110059.

Asfor, A., S. Nazki, V.R.A.P. Reddy, E. Campbell, K.L. Dulwich, E.S. Giotis, M.A. Skinner, and A.J. Broadbent. 2021. Transcriptomic analysis of inbred chicken lines reveals infectious bursal disease severity is associated with greater bursal inflammation in vivo and more rapid induction of pro-inflammatory responses in primary bursal cells stimulated ex vivo. Viruses 13:933. doi: 10.3390/v13050933

Aston, E., A. Nayaran, S. Egaña, M. Wallach, and R.A. Gallardo. Hyperimmunized chickens produce neutralizing antibodies against SARS-CoV-2. 2021. Scientific Reports. Submitted https://www.researchsquare.com/article/rs-515320/v1

Aston, E., Y. Wang, K. Tracy, R.A. Gallardo, S.J. Lamont, and H. Zhou. 2021. Comparison of cellular immune responses to avian influenza in two genetically distinct , highly inbred chickens. Veterinary Immunology and Immunopathology 235:110233. https://www.sciencedirect.com/science/article/pii/S0165242721000519

Bai, H., Y. He, Y. Ding, Q. Chu, L. Lian, E.M. Heifetz, N. Yang, H.H. Cheng, H. Zhang, J. Chen, and J. Song. 2020. Genome-wide characterization of copy number variations in the host genome in genetic resistance to Marek's disease using next generation sequencing. BMC Genetics 21:77. doi: 10.1186/s12863-020-00884-w.

Bai, Y., P. Yuan, H. Zhang, R. Ramachandran, N. Yang, and J. Song. 2020. Adiponectin and its receptor genes expression in response to MDV infection of White Leghorns. Poultry Science, doi: 10.1016/j.psj.2020.06.004

Bai, H., Y. He, Y. Lin, Q. Leng, J.A. Carrillo, J. Liu, F. Jiang, J. Chen, and J. Song. 2020. Identification of a novel differentially methylated region adjacent to ATG16L2 in lung cancer cells using methyl-CpG binding domain protein enriched genome sequencing. Genome, doi: 10.1139/gen-2020-0071

Bortoluzzi, C., Lahaye, L., Perry, F., Arsenault, R.J., Santin, E., Korver, D.R., and Kogut, M.H. 2021. A protected complex of biofactors and antioxidants improved growth performance and modulated the immunometabolic phenotype of broiler chickens undergoing early life stress. Poultry Science 101176.

Chang, R., P. Pandey, Y. Li, C. Venkitasamy, Z Chen, R. Gallardo, B. Weimer, B. and J.M. Russell. 2020. Assessment of gaseous ozone treatment on Salmonella Typhimurium and Escherichia coli O157: H7 reductions in poultry litter. Waste Management, 117: 42-47.

Chasser, K.M., K. McGovern, A.F. Duff, B.D. Graham, W.N. Briggs, D.R. Rodrigues, M. Trombetta, E. Winson, and L.R. Bielke. 2021. Evaluation of day of hatch exposure to various Enterobacteriaceae on inducing gastrointestinal inflammation in chicks through two weeks of age. Poultry Science 100:101193.

Chasser, K.M., K. McGovern, A.F. Duff, M. Trombetta, B.D. Graham, L. Graham, W.N. Briggs, D.R. Rodrigues, and L.R. Bielke. 2021. Enteric permeability and inflammation associated with day of hatch Enterobacteriaceae inoculation. Poultry Science 100:101298.

Conradie, A.M., L.D. Bertzbach, J. Trimpert, J.N. Patria, S. Murata, M.S. Parcells, and B.B. Kaufer. 2020. Distinct polymorphisms in a single herpesvirus gene are capable of enhancing virulence and mediating vaccinal resistance. PLoS Pathogens 16(12):e1009104, doi: 10.1371/journal.ppat.1009104.

Cotter, P.F. 2021a. Erythroplastids of duck blood produced by cytokinesis, lysis, and amitosis Journal of World Poultry Research 11(2): 271-277, https://dx.doi.org/10.36380/jwpr.2021.32

Cotter, P.F. 2021b. Atypical hemograms of the commercial duck. Poultry Science100, doi: 10.1016/j.psj.2021.101248

da Silva, A.P. and R.A. Gallardo. 2020. Review: The Chicken MHC: Insights on genetic resistance, immunity and inflammation following infectious bronchitis virus infections. Viruses, https://www.mdpi.com/2076-393X/8/4/637

da Silva, A.P., R. Hauck, S.R.C Nociti, C. Kern, H.L. Shivaprasad, H. Zhou, and R.A. Gallardo. 2021. Molecular biology and pathological process of an infectious bronchitis virus with enteric tropism in commercial broilers. Viruses 13,1477. Respiratory Diseases Special Edition. https://www.mdpi.com/1999-4915/13/8/1477#

da Silva, A.P., C. Giroux, H.S. Sellers, A. Mendoza-Reilley, S. Stoute, and R.A. Gallardo. 2021. Characterization of an IBV isolated from commercial layers suffering from false layer syndrome. Avian Diseases. https://doi.org/10.1637/aviandiseases-D-21-00037

Del Vesco, A.P., H.J. Jang, M.S. Monson, and S.J. Lamont. 2021. Role of chicken oligoadenylate synthase like gene during in vitro Newcastle disease virus infection. Poultry Science, doi.org/10.1016/j.psj.2021.101067

Dulwich, K.L., A. Gray, A. Asfor, S. Giotis, M. Skinner, and AJ Broadbent. 2020. The stronger downregulation of in vitro and in vivo innate antiviral responses by a very virulent strain of infectious bursal disease virus (IBDV), compared to a classical strain, is mediated, in part, by the VP4 protein. Frontiers in Cellular and Infection Microbiology 10.315. doi: 10.3389/fcimb.2020.00315

Egaña-Labrin, S., C. Jerry, H.J. Roh, A.P. da Silva, C. Corsiglia, B. Crossley, D. Rejmanek, and R.A. Gallardo. 2021. Avian reoviruses of the same genotype induce different pathology in chickens. Avian Diseases, Accepted.

Emami, N.K, and R.A. Dalloul. 2021. CENTENNIAL REVIEW: Recent developments in host-pathogen interactions during necrotic enteritis in poultry. Poultry Science 100:101330.

Emami, N.K., A. Calik, A., M.B. White, E.A. Kimminau, and R.A. Dalloul. 2021.Managing broilers gut health with antibiotic-free diets during subclinical necrotic enteritis. Poultry Science 100:101055.

Erf, G.F., G. Le Pape, S. Rémy, and C. Denesvre. 2020. Mardivirus infection and persistence in feathers of a chicken model harboring local autoimmune response. Microorganisms 8(10):1613. https://doi.org/10.3390/microorganisms8101613

Felfoldi, B., H. Wang, N. Nuthalapati, R. L. Taylor, Jr., J. D. Evans, S. L. Branton, and G. T. Pharr. 2021. Expression of chicken leukocyte cell-derived chemotaxin 2 in the embryonic bursa of Fabricius. Int. J. Poult. Sci. 20: 43-47 https://doi.org/10.3923/ijps.2021.43.47

French, C.E., M.A. Sales, S.J. Rochell, A. Rodriguez, and G.F. Erf. 2020. Local and systemic inflammatory responses to lipopolysaccharide in broilers: new insights using a two-window approach. Poultry Science 99:6593-6605. https://doi.org/10.1016/j.psj.2020.09.078

Garcia, G., Jr, A. Sharma, A. Ramaiah, C. Sen, A. Purkayastha, D.B. Kohn, M.S. Parcells, S. Beck, H. Kim, M.A. Bakowski, M.G. Kirkpatrick, L. Riva, K.C. Wolff, B. Han, C. Yuen, Ulmert D, Purbey PK, Scumpia P, Beutler N, Rogers TF, Chatterjee AK, Gabriel G, Bartenschlager R, Gomperts B, C.N. Svendsen, U.A.K. Betz, R.D. Damoiseaux, and V. Arumugaswami. 2021. Antiviral drug screen identifies DNA-damage response inhibitor as potent blocker of SARS-CoV-2 replication. Cell Reports 35(1):108940. doi: 10.1016/j.celrep.2021.108940

Glenn, H., G.J. Mullenix, and G.F. Erf. 2021. Effect of low crude protein diet with and without Spirulina platensis inclusion on white blood cell profiles in broilers. Discovery 21:38-44. (Undergraduate Journal Publication)

Gonzales-Viera, O., F. Carvallo-Chaigneau, E. Blair, D. Rejmanek, O. Erdogan-Bamac, K. Sverlow, A. Figueroa, R.A. Gallardo, and A. Mete. 2021. Infectious bronchitis virus prevalence, characterization and strain identification in California backyard chickens. Avian Diseases DOI: 10.1637/aviandiseases-d-20-00113

Guo, Y., W. He, H. Mou, L. Zhang, J. Chang, S. Peng, A. Ojha, R. Tavora, M.S. Parcells, G. Luo, W. Li, G. Zhong, H. Choe, M. Farzan, and B.D. Quinlan. 2021. An engineered receptor-binding domain improves the immunogenicity of multivalent SARS-CoV-2 vaccines. mBio 12(3):e00930-21, doi: 10.1128/mBio.00930-21

Han, Y., S. Renu, V. Patil, J. Schrock, N. Feliciano-Ruiz, R. Selvaraj, and G.J. Renukaradhya. 2020. Immune response to salmonella enteritidis infection in broilers immunized orally with chitosan-based salmonella subunit nanoparticle vaccine. Frontiers in immunology 11:935.

Han, Y., S. Renu, J. Schrock, K.Y. Acevedo-Villanueva, B. Lester, R. Selvaraj ,and G.J. Renukaradhya. 2020.Temporal dynamics of innate and adaptive immune responses in broiler birds to oral delivered chitosan-based Salmonella subunit nanoparticle vaccine. Veterinary Immunology and Immunopathology, https://doi.org/10.1016/j.vetimm.2020.110111

Jang, H.-J., Monson, M., Kaiser., M., Lamont, S.J. 2020. Induction of chicken host defense peptides within disease-resistant and -susceptible lines. GENES 11:1195; doi:10.3390/genes11101195

Lee, A., G.C. Dal Pont, M. Battaglia, R. Arsenault, and M. Kogut. 2021. Role of JAK-STAT pathway in chicks fed with chestnut tannins. Animals 11(2):337.

Lee, A., G.C. Dal Pont, M.B. Farnell, S. Jarvis, M. Battaglia, R. Arsenault, and M. Kogut. 2021. Supplementing chestnut tannins in the broiler diet mediates a metabolic phenotype of the ceca. Poultry Science 100:47-54.

Mon, K.K.Z., C. Kern, G. Chanthavixay, Y. Wang, and H. Zhou. 2021. Tolerogenic immunoregulation towards Salmonella Enteritidis contribute to colonization persistence in young chicks. Infection and Immunity. doi: 10.1128/IAI.00736-20.

Monson, M.S. and S.J. Lamont. 2021. Genetic resistance to avian pathogenic Escherichia coli (APEC): current status and opportunities. Avian Pathology, doi: 10.1080/03079457.2021.1879990

Monson, M.S., B.L. Bearson,, M.J. Sylte, T. Looft, S.J. Lamont, S.J., and S.M.D. Bearson. 2021.Transcriptional response of blood leukocytes from turkeys challenged with Salmonella enterica serovar Typhimurium UK1. Veterinary Immunology and Immunopathology 232: doi.org/10.1016/j.vetimm.2020.110181

Mortada, M., D.E. Cosby, R. Shanmugasundaram, and R.K. Selvaraj. 2020. In vivo and in vitro assessment of commercial probiotic and organic acid feed additives in broilers challenged with Campylobacter coli. Journal of Applied Poultry Research  29:435-446. doi:10.1016/j.japr.2020.02.001

Mullenix G. J, E.S. Greene, N.K. Emami, G. Tellez-Isaias, W.G. Bottje, G.F. Erf, M.T. Kidd, and S. Dridi. 2021. Spirulina platensis inclusion reverses circulating pro-inflammatory (chemo)cytokine profiles in broilers fed low-protein diets. Frontiers in Veterinary Science https://doi.org/10.3389/fvets.2021.640968

Mushi, J., G.H. Chiwanga, E. Mollel, M. Walugembe, R.A. Max, P. Msoffe, R.A. Gallardo, T. Kelly, S. Lamont, J. Dekkers, H. Zhou, and A. Muhairwa. 2021. Antibody response, viral load, viral clearance and growth rate in Tanzanian free-range local chickens infected with lentogenic Newcastle disease virus. 2021. Journal of Veterinary Medicine and Animal Health 13:98-105.

Mushi, J., G.H. Chiwanga, E.N. Amuzu-Aweh, M. Walugembe, R.A. Max, S.J. Lamont, T.R. Kelly, E.L. Mollel, P.L. Msoffe, J. Dekkers, R. Gallardo, H. Zhou, and A.P. Muhairwa. 2020. Phenotypic variability and population structure analysis of Tanzanian free-range local chickens. BMC Veterinary Research 16:360. doi: 10.1186/s12917-020-02541-x.

Neerukonda SN, N.A. Egan, J. Patria, I. Assakhi, P. Tavlarides-Hontz, S. Modla, E.R. Muñoz, M.B. Hudson, and M.S. Parcells. 2020. A comparison of exosome purification methods using serum of Marek's disease virus (MDV)-vaccinated and -tumor-bearing chickens. Heliyon 6(12):e05669. doi: 10.1016/j.heliyon.2020.e05669

Nuthalapati, N., T.A. Burks, R.L. Taylor, Jr., P.B. Siegel, and G. . Pharr. 2021. Protein tyrosine kinase gene expression profiles in the embryonic bursa of Fabricius of chicken lines selected for high and low antibody responses. International Journal of Poultry Science 20:173-178 https://doi.org/10.3923/ijps.2021.173.178

Omara, I.I., C.M. Pender, M.B. White, and R.A. Dalloul. 2021. The modulating effect of dietary beta-glucan supplementation on expression of immune response genes of broilers during a coccidiosis challenge. Animals 11:151.

Overbey, E.G., T.T. Ng, P. Catini, L.M. Griggs, P. Stewart, S. Tkalcic, R.D. Hawkins, and Y. Drechsler: 2021. Transcriptomes of an array of chicken ovary, intestinal, and immune cells and tissues. Frontiers in Genetics 12:664424. doi: 10.3389/fgene.2021.664424

Patel, R.T., B.M. Gallamoza, P. Kulkarni, M.L. Sherer, N.A. Haas, E. Lemanski, I. Malik, K. Hekmatyar, M.S. Parcells, and J.M. Schwarz. 2021. An examination of the long-term neurodevelopmental impact of prenatal zika virus infection in a rat model using a high resolution, longitudinal MRI approach. Viruses 13(6):1123. doi: 10.3390/v13061123

Raddatz, G., R.J. Arsenault, B. Aylward, R. Whelan, F. Böhl, and F. Lyko. 2021. A chicken DNA methylation clock for the prediction of broiler health. Communications Biology 4(1):1-8.

Renu, S., Y. Han, S. Dhakal, Y.S. Lakshmanappa, S. Ghimire, N. Feliciano-Ruiz, S. Senapati, B. Narasimhan, R. Selvaraj, and G.J. Renukaradhya. 2020. Chitosan-adjuvanted Salmonella subunit nanoparticle vaccine for poultry delivered through drinking water and feed. Carbohydrate Polymers 243:116434.

Saelao, P., Y. Wang, G. Chanthavixay, V. Yu, R.A. Gallardo, J. Dekkers, S.J. Lamont, T. Kelly, and H. Zhou. 2021. Distinct transcriptomic response to Newcastle disease virus infection during heat stress in chicken tracheal epithelial tissue. Scientific Reports 11:7450. https://www.nature.com/articles/s41598-021-86795-x.pdf

Shanmugasundaram, R., A. Markazi, M. Mortada, T.T. Ng, T.J. Applegate, L.R. Bielke, and R.K. Selvaraj. 2020. Effect of synbiotic supplementation on caecal Clostridium perfringens load in broiler chickens with different necrotic enteritis challenge models. Poultry Science 99(5):2452-2458. doi:10.1016/j.psj.2019.10.081

Taylor, R.L., Jr. 2021. The 100 most cited papers from Poultry Science’s centennial. Poultry Science 100:, https://doi.org/10.1016/j.psj.2021.101256

Taylor, R.L., Jr. and D. Jones. 2021. A century of progress 1921-2021. Poult. Sci. 100:101073 https://doi.org/10.1016/j.psj.2021.101073

Tong, Z.W.M., A.C. Karawita, C. Kern, H. Zhou, J.E. Sinclair, L. Yan, K.Y. Chew, S. Lowther, L. Trinidad, A. Challagulla, K.A. Schat, M.L. Baker, and K.R. Short. 2021. Primary chicken and duck endothelial cells display a differential response to infection with highly pathogenic avian influenza virus. Genes 12 (6):901.

Troxell, B., M. Mendoza, R. Ali, M. Koci, and H. Hassan. 2020. The attenuated Salmonella enterica serovar Typhimurium, strain NC983, is immunogenic, and protective against virulent Typhimurium challenges in mice. Vaccines 8 (4), 646. https://doi.org/10.3390/vaccines8040646

Vega-Rodriguez, W., H. Xu, N. Ponnuraj, H. Akbar, T. Kim, and K.W. Jarosinski. 2021. The requirement of glycoprotein C (gC) for interindividual spread is a conserved function of gC for avian herpesviruses. Scientific Reports 11(1):7753.

Vega-Rodriguez W., N. Ponnuraj, M. Garcia, and K.W. Jarosinski. 2021. The requirement of glycoprotein C for interindividual spread is functionally conserved within the Alphaherpesvirus genus (Mardivirus), but not the host (Gallid). Viruses 13(8):1419

Wilkinson, N.G., R.T. Kopulos, L.M. Yates, W.E. Briles, and R.L. Taylor, Jr. 2021. Research Note: Rous sarcoma growth differs among congenic lines containing major histocompatibility (B) complex recombinants.  Poultry Science 100:

Zhang, L., X. Wei, R. Zhang, M. Koci, D. Si, B. Ahmad, and H. Guo. 2020. C-terminal amination of a cationic anti-inflammatory peptide improves bioavailability and inhibitory activity against LPS-induced inflammation. Frontiers in Immunology 15. doi 10.3389/fimmu.2020.618312

Zhao, C.F., X. Li, B. Han, L.J. Qu, C.J. Liu, J. Song, N. Yang, and L. Lian. 2020. Knockdown of the Meq gene in Marek's disease tumor cell line MSB1 might induce cell apoptosis and inhibit cell proliferation and invasion. Journal of Integrative Agriculture 19:2767-2774. doi.org/10.1016/S2095

 

 

Published Abstracts

Arsenault, R.J. Strategic Modulation of Intestinal Microbiome: An Immunologist Perspective. Poultry Science Annual Meeting. 2021, July, Virtual Conference.

Arsenault, R.J. Kinomics: Regulation of the Metabolome. Poultry Science Annual Meeting. 2021, July, Virtual Conference.

Arsenault, R.J. The Immunometabolic Interface Between Host and Microbiota. Animal Nutrition Conference of Canada. 2021, May, Virtual Conference.

Beck, C. N., J. Santamaria, M. A. Sales, and G. F. Erf. 2021. Primary and recall immune responses to autogenous Salmonella vaccine or Salmonella lipopolysaccharide administration in Light-brown Leghorn pullets. Poult. Sci. PSA Virtual Conference.

Bielke, L.R.. A.F. Duff, K. M. Chasser, W.N. Briggs, and K.M. Wilson. “Modeling necrotic enteritis: Applying lessons learned.” Poultry Science Association Annual Meeting, Virtual Conference, July 2021.

Blue, C.E.C., E.A. Kimminau, M.B. White, N.K. Emami, and R.A. Dalloul. 2021. Effects of a phytogenic feed additive on broilers during a necrotic enteritis challenge. International Poultry Scientific Forum (Virtual),  Atlanta, GA.

Chasser, K.M., A.F. Duff, K.E. McGovern, M. Trombetta, and L.R. Bielke. “Comparison of chick quality, health, and inflammation from two hatchery environments.” Poultry Science Association Annual Meeting, Virtual Conference, July 2021.

Cueva, Justin R., Nicholas Egan, Imane Assakhi, Phaedra Tavlarides-Hontz, and Mark S. Parcells. Sequential interactions of meq proteins with polycomb repressive complex proteins in marek’s disease virus latency. The 13^th International Symposium on Marek’s Disease and Avian Herpesviruses, June 2021.

Dallakoti, Aksana, Sabarinath Neerukonda, Phaedra Travlarides-Hontz, and Mark S. Parcells. Transcriptomic and proteomic analysis of exosomes released by Marek’s disease virus transformed t-cell lines. The 13^th International Symposium on Marek’s Disease and Avian Herpesviruses, June 2021.

Duff, A.F., K.M. Chasser, K.E. McGovern, M. Trombetta, and L.R. Bielke. Adaptation of cell culture assay measuring fluorescent quantification of β-D-Glucuronidase activity for assessment of ileal granulocyte degranulation in tissue scrapings. Poultry Science Association Annual Meeting, Virtual Conference, July 2021.

Evans, R.D., J. Santamaria, and G.F. Erf. 2021. Evaluation of the toxigenicity of lipopolysaccharide associated with chicken hepatopathy. AAAP Virtual Conference.

Koci, M. Connecting the Microbiome to Immune Function Through Metabolomics. 3rd Microbiome Movement – Animal Health & Nutrition. Online. October 2020 (International meeting).

McGovern, K.E., J.C. Bielke, A.F. Duff, A. Calvert, K.M. Chasser, and L.R. Bielke. Measuring Eimeria oocysts viability via auto-fluorescence following anticoccidial treatment. Poultry Science Association Annual Meeting, Virtual Conference, July 2021.

Miller, Joshua, Kyle Moskowitz, Samuel Keating, Abhyudai Singh, Prasad Dhurjati, Andelé Conradie, Benedikt B. Kaufer, Phaedra Travlarides-Hontz, and Mark Parcells. The development of agent-based and mathematical models for Marek’s disease virus (mdv) lytic and latent infections. The 13^th International Symposium on Marek’s Disease and Avian Herpesviruses, June 2021.

Parcells, Mark S., Joshua S. Miller, Erin Gollhardt, Aksana Dallakoti, Shannon Modla, Eric Muñoz, Matthew B. Hudson, and Ryan J. Arsenault. Effect of serum exosomes from vaccinated and protected and tumor-bearing chickens on immune function. The 13^th International Symposium on Marek’s Disease and Avian Herpesviruses, June 2021.

Patria, Joseph, Nirajan Bhandari, Phaedra Travlarides-Hontz, Andelé Conradie, Benedikt B. Kaufer, and Mark S. Parcells. Evaluation of the effect of Meq isoform on Marek’s disease virus (MDV) pathogenicity. The 13^th International Symposium on Marek’s Disease and Avian Herpesviruses, June 2021.

Santamaria, J., C.N. Beck, M.A. Sales, and G.F. Erf. 2021. Inflammatory and antibody responses to intradermally administered autogenous Salmonella vaccine isolates and content-matched Salmonella lipopolysaccharide. Poultry Science association Annual Conference (Virtual).

Taylor, R.L., Jr., W. Drobik-Czwarno, A. Wolc, and J.E. Fulton. 2021. Candidate genes for A and E blood group systems in the chicken. Poultry Science 100(E-Suppl. 1):54.

Trombetta, M., K.M. Chasser, A.F. Duff, K.E. McGovern, D.R. Rodrigues, D. Jeffery, D.J. Shafer, and L.R. Bielke. Effect of probiotics on early microbial colonization in day of hatch ducklings. Poultry Science Association Annual Meeting, Virtual Conference, July 2021.

Wisser-Parker, Kristy, Kristen Wooten, Phaedra Talverides-Hontz, and Mark S. Parcells. Assessment of the role of IRG1 and itaconate on Marek’s disease virus (NDV) infection. The 13^th International Symposium on Marek’s Disease and Avian Herpesviruses, June 2021.

 

Book Chapters:

Erf, G.F. (in press). Autoimmune diseases of poultry. Pp. xxx-xxx. In: Avian Immunology, 3rd Ed.. K.A. Schat, B. Kaspers, T. Goebel, L. Vervelde, Eds., Elsevier, London, San Diego

Lamont, S.J., J.C.M. Dekkers, A. Wolc, and H. Zhou. (in press). Immunogenetics and the mapping of immunological functions. Pp. xxx-xxx. In: Avian Immunology. K.A. Schat, B. Kaspers, T. Goebel, L. Vervelde, Eds., Elsevier, London, San Diego

 

 

6.3 Thesis/Dissertation

Chasser, Kaylin. Effect of day of hatch inoculation with Enterobacteriaceae on inflammation and enteric permeability in broilers. Ph.D. dissertation, May 2021. Ohio State University. Supervisor: Lisa R. Bielke

Johnson, Casey. A Kinomic Analysis of the Immunometabolic Effects of Antibiotic Alternatives in Necrotic Enteritis Disease Model. Ph.D. Dissertation. 2021. University of Delaware. Supervisor: Ryan J. Arsenault

White, Mallory B. In ovo and feed application of probiotics or synbiotics and response of broiler chicks to post-hatch necrotic enteritis. PhD Dissertation. 2021  Virginia Tech. Supervisor: Rami A. Dalloul

10/11/2022

Peer Reviewed Publications

Asfor A, Nazki S, Reddy VRAP, Campbell E, Dulwich KL, Giotis ES, Skinner MA, Broadbent AJ. Transcriptomic Analysis of Inbred Chicken Lines Reveals Infectious Bursal Disease Severity Is Associated with Greater Bursal Inflammation In Vivo and More Rapid Induction of Pro-Inflammatory Responses in Primary Bursal Cells Stimulated Ex Vivo. Viruses, 2021, 13(5), 933; doi: 10.3390/v13050933

Aylward, B.A., Johnson, C.N., Perry, F., Whelan, R., Zhang, C., Arsenault, R.J. Broiler chickens with 1950s genetics display a more stable immune profile as measured by kinome, mRNA expression, microbiome and metabolism when stimulated early in life with CpG. 2022. Poultry Science. 101(5), p.101775.

Bai H, He Y, Ding Y, Chu Q, Lian L, Heifetz EM, Yang N, Cheng HH, Zhang H, Chen J, *Song  Genome-wide characterization of copy number variations in the host genome in genetic resistance to Marek's disease using next-generation sequencing. BMC Genet. 2021 Jul 16;21(1):77. DOI: 10.1186/s12863-020-00884-w.

Blue, C.E.C, N.K. Emami, M.B. White, O. Gutierrez, S. Cantley, and R.A. Dalloul. 2022. Inclusion of Clarity Q manages growth performance, immune response, and nutrient transports of broilers during subclinical necrotic enteritis. Under review.

Blue, C.E.C, N.K. Emami, M.B. White, E. Kimminau, and R.A. Dalloul. 2022. Assessing the effects of a proprietary phytogenic feed additive on broilers during a necrotic enteritis challenge. Under review.

Botchway ,P.K., Amuzu-Aweh, E.N., Naazie, A., Aning, G. K., Otsyina, H.R., Saelao, P., Wang, Y., Zhou, H., Walugembe, M., Dekkers, J., Lamont, S.J., Gallardo, R.A., Kelly, T.R., Bunn, D. and Kayang, B.B. 2022. Host response to successive challenges with lentogenic and velogenic Newcastle disease virus in local chickens of Ghana. Poultry Science 101:102138. doi.org/10.1016/j.psj.2022.102138

Campbell E, Reddy VRAP, Gray A, Skinner M, Jennifer Simpson, Pippa Hawes, Broadbent AJ. Discrete virus factories form in the cytoplasm of cells co-infected with two strains of the segmented dsRNA virus, infectious bursal disease virus (IBDV), that subsequently coalesce. Journal of Virology, 2020, Jun 16; 94 (13), e-02107-19, doi: 10.1128/JVI.02107-19.

Coe, C., T. Boltz, R. Stearns, P. Foster, R. L. Taylor, Jr., J. S. Moritz, J. Jaczynski, A. Freshour, and C. Shen. 2022. Thermal inactivation of Salmonella typhimurium and the surrogate Enterococcus faecium in mash broiler feed in a laboratory scale circulated thermal bath. Poult. Sci. 101:101976 https://doi.org/10.1016/j.psj.2022.101976

Cotter, P. F., 2021a. Erythroplastids of duck blood produced by cytokinesis, lysis, and amitosis J. World Poult. Res. 11(2): 271-277. DOI: https://dx.doi.org/10.36380/jwpr.2021.32

Cotter, P. F., 2021b. Atypical hemograms of the commercial duck, Poult. Sci.100:2021,101248, ISSN 0032-5791, https://doi.org/10.1016/j.psj.2021.101248

Da Silva, A.P., R. Jude, R.A. Gallardo. Infectious bronchitis virus: A comprehensive multilocus genomic analysis to compare DMV/1639 and QX strains. Viruses. 2022.

Dulwich KL, Gray A, Asfor A, Giotis S, Skinner M, Broadbent AJ. The stronger downregulation of in vitro and in vivo innate antiviral responses by a very virulent strain of infectious bursal disease virus (IBDV), compared to a classical strain, is mediated, in part, by the VP4 protein. Frontiers in Cellular and Infection Microbiology, 2020, June 9, 10.315. doi: 10.3389/fcimb.2020.00315

Egaña-Labrin, S., C. Jerry, H. J. Roh, A. P. da Silva, C. Corsiglia, B. Crossley, D. Rejmanek, R. A. Gallardo. Avian Reoviruses of the Same Genotype Induce Different Pathology in Chickens. Avian Diseases. 2022.

Figueroa, A., E. Escobedo, M. Solis, C. Rivera, A. Ikelman and R.A. Gallardo. Outreach Efforts to Prevent Newcastle Disease Outbreaks in Southern California. Viruses. 2022

Emami, N.K., and R.A. Dalloul. 2021.  Centennial Review: Recent developments in host-pathogen interactions during necrotic enteritis in poultry. Poultry Science 100:101330.

Emami, N.K., A.L. Fuller, and R.A. Dalloul. 2022.  Lateral transmission of Histomonas meleagridis in turkey poults raised on floor pens.  Poultry Science 101:101951.

Fulton. J. E. W. Drobik-Czwarno, A. Wolc, A. M. McCarron, A.R. Lund, C. J. Schmidt and R. L. Taylor, Jr. 2022.  The chicken A and E blood group systems are due to variation in proteins encoded by genes within the chicken RCA syntenic gene region. J. Immunol. 209: 1-10 https://doi.org/10.4049/jimmunol.2101010

Gallardo, R.A. Molecular Characterization of Variant Avian Reoviruses and its Relationship with Antigenicity and Pathogenicity. Avian Diseases. 2022.

Gallardo, R.A., and A.P. Da Silva. MHC B Complex Genetic Resistance and Immune Responses to Infectious Bronchitis Virus in Chickens. Avian Diseases. 2022.

Gallardo, R.A., da Silva, A.P., Gilbert, R., Alfonso, M., Conley, A., Jones, K., Stayer, P.A. and Hoerr, F.J., 2022. Testicular Atrophy and Epididymitis-Orchitis Associated with Infectious Bronchitis Virus in Broiler Breeder Roosters. Avian Diseases, 66(1), pp.112-118.

Gilbert, I. M, J. M. Santamaria, and G. F. Erf. 2022. Time-course investigation of dermal leukocyte response to lipoteichoic acid in chickens.  Discovery 22:44-50.

Jiang J, Chen C, Cheng S, Yuan X, Jin J, Zhang C, Sun X, Song J, Zuo Q, Zhang Y, Chen G, Li B. Long Noncoding RNA LncPGCR Mediated by TCF7L2 Regulates Primordial Germ Cell Formation in Chickens. Animals (Basel). 2021 Jan 24;11(2):292. DOI: 10.3390/ani11020292. PMID: 33498947; PMCID: PMC7912682.

Jing, Y., Yuan, Y., Monson, M. Wang, P., Mu, F., Zhang, Q., Na, W., Zhang, K., Wang, Y., Leng, L., Li, Y., Luan, P., Wang, N., Guo, R., Lamont, S., Li, H., and Yuan, H. 2022. Multi-omics association reveals the effects of intestinal microbiome-host interactions on fat deposition in broiler lines divergently selected for abdominal fat content. Frontiers in Microbiology 12:815538. doi: 10.3389/fmicb.2021.815538

Kaiser, M., Hsieh, J., Kaiser, P. and Lamont, S.J. 2022. Differential immunological response detected in mRNA expression profiles among diverse chicken lines in response to Salmonella challenge. Poultry Sci. 101: 101605 https://doi.org/10.1016/j.psj.2021.101605

Kogut, M., Genovese, K.J., Byrd, J.A., Swaggerty, C., He, H., Farnell, Y., Arsenault, R. Chicken-Specific Kinome Analysis of Early Host Immune Signaling Pathways in the Cecum of Newly Hatched Chickens Infected with Salmonella enterica Serovar Enteritidis. 2022. Frontiers Cellular and Infection Microbiology. 857.

Krieter A, Xu H, Akbar H, Kim T, Jarosinski KW*. 2022. The conserved Herpesviridae protein kinase (CHPK) of Gallid alphaherpesvirus 3 (GaHV3) in required for horizontal spread and natural infection in chickens. Viruses 14(3):586. https://doi.org/10.3390/v14030586

Meyer, M.M., Lamont, S.J., and Bobeck, E.A. 2022. Mitochondrial and glycolytic capacity of peripheral blood mononuclear cells isolated from diverse poultry genetic lines: optimization and assessment. Frontiers in Veterinary Sci. 8:815878. doi: 10.3389/fvets.2021.815878

Montine, P., T.R. Kelly, S. Stoute, A.P. da Silva, B. Crossley, C. Corsiglia, H.L. Shivaprasad, and R.A. Gallardo. Infectious Bronchitis Virus Surveillance in Broilers in California (2012-2020). Avian Diseases. 2022.

Nguyen, Veronica, Asli Mete, Anibal Armien, Ana P. da Silva, Patrick Montine, Charles Corsiglia, VM Sadagopa Ramanujam, Karl E. Anderson, Ruediger Hauck, and Rodrigo A. Gallardo. Porphyrin Accumulation and Biliary Lithiasis Causing Diffusely Black Livers in Broiler Chickens. Avian Diseases 66, no. 2 (2022): 1-5.

Reddy VRAP, Nazki S., Brodrick A.J., Asfor A., Urbaniec J., Morris Y., Broadbent A. J. Evaluating the breadth of neutralizing antibody responses elicited by infectious bursal disease virus (IBDV) genogroup A1 strains using a novel chicken B-cell rescue system and neutralization assay. Journal of Virology, 2022, Sep 7;e0125522.doi: 10.1128/jvi.01255-22

Reddy VRAP, Campbell EA, Wells J, Simpson J, Nazki S, Hawes PC, Broadbent AJ. Birnaviridae virus factories show features of liquid-liquid phase separation, and are distinct from paracrystalline arrays of virions observed by electron microscopy. Journal of Virology, 2022, Feb 9;jvi0202421. doi: 10.1128/jvi.02024-21.

Redweik, G.A.J., Kogut, M.H., Arsenault, R.J., Lyte, M., Mellata, M. Reserpine improves Enterobacteriaceae resistance in chicken intestine via neuro-immunometabolic signaling and MEK1/2 activation. 2021. Communications Biology, 4(1), 1-11

Rocchi, A., J. Ruff, C. J. Maynard, A. J. Forga, R. Señas-Cuesta, E. S. Greene, J. D. Latorre, C. N. Vuong, B. D. Graham, X. Hernandez-Velasco, G. Tellez Jr., V. M. Petrone-Garcia, B. M. Hargis, G. F. Erf, C. M. Owens, and G. Tellez-Isaias. 2022. Cyclic heat stress model alters intestinal permeability, bone mineralization, and meat quality in broiler chickens. Animals 12:1273 doi: 10.3390/ani12101273.

Sato J, Murata S, Yang Z, Kaufer BB, Fujisawa S, Seo H, Maekawa N, Okagawa T, Konnai S, Osterrieder N, Parcells MS, Ohashi K. Effect of Insertion and Deletion in the Meq Protein Encoded by Highly Oncogenic Marek's Disease Virus on Transactivation Activity and Virulence. Viruses. 2022 Feb 14;14(2):382. doi: 10.3390/v14020382. PMID: 35215975; PMCID: PMC8876991.

Sherer ML, Lemanski EA, Patel RT, Wheeler SR, Parcells MS, Schwarz JM. A Rat Model of Prenatal Zika Virus Infection and Associated Long-Term Outcomes. Viruses. 2021 Nov 18;13(11):2298. doi: 10.3390/v13112298. PMID: 34835104; PMCID: PMC8624604.

Song, J. He, Y, Ding, Y. Tian, F. Zhao, K., Zhang, H., Yu, Y., Yang, N., Lian, L., Luo, J., Mitra, A. The Epigenetics and Plasticity of CD4+ T Cells in Poultry Health, Journal of Animal Science, Volume 99, Issue Supplement_3, November 2021, Page 55, https://doi.org/10.1093/jas/skab235.098

Sorrick, J., W. Huett, K. A. Byrne, and G. F. Erf. 2022. Autoimmune activities in choroids of visually impaired Smyth chickens with autoimmune vitiligo. Front. Med. 9:846100. doi:10.3389/fmed.2022.846100.

Sun C, Jin K, Zuo Q, Sun H, Song J, Zhang Y, Chen G, Li B. Characterization of Alternative Splicing (AS) Events during Chicken (Gallus gallus) Male Germ-Line Stem Cell Differentiation with Single-Cell RNA-seq. Animals (Basel). 2021 May 20;11(5):1469. doi: 10.3390/ani11051469. PMID: 34065391; PMCID: PMC8160964.

Sun C, Jin K, Zhou J, Zuo Q, Song J, Yani Z, Chen G, Li B. Role and function of the Hintw in early sex differentiation in chicken (Gallus gallus) embryo. Anim Biotechnol. 2021 Jun 21:1-11. DOI: 10.1080/10495398.2021.1935981. Epub ahead of print. PMID: 34153202.

Sun, H., Yang, Y., Cao, Y., Li, H., Qu, L., Lamont, S.J. 2022. Gene expression profiling of RIP2-knockdown in HD11 macrophages—elucidation of potential pathways (gene network) when challenged with avian pathogenic E. coli (APEC) BMC Genomics 23 (1), 1-20. doi.org/10.1186/s12864-022-08595-5

Sun, H., Li, N., Tan, J., Li, H., Zhang, J., Qu, L., Lamont, S.J. 2022. Transcriptional regulation of RIP2 gene by NFIB is associated with cellular immune and inflammatory response to APEC infection Int. J. Mol. Sci. 23(7):3814. doi.org/10.3390/ijms23073814

Swaggerty, C.L., Byrd, J.A., Arsenault, R.J.,  Perry, F., Johnson, C.N., Genovese, K.J., He, H., Kogut, M.H., Piva, A., and Grilli, E. A blend of microencapsulated organic acids and botanicals reduces necrotic enteritis via specific signaling pathways in broilers. 2022. Poultry Science. p.101753.

Taylor, R. L., Jr. 2022.  Nunc Dimitis – Fred M. McCorkle, Jr. Poult. Sci. 101:101854 https://doi.org/10.1016/j.psj.2022.101854

Taylor, R. L., Jr. 2022.  The 50 most downloaded articles from Poultry Science in 2021. Poult. Sci. 101: 101818 https://doi.org/10.1016/j.psj.2022.101818

Tudeka, C.K., Aning, G.K., Naazie, A., Botchway, P.K., Amuzu-Aweh, E.N., Agbenyegah, G.K., Enyetornye, B., Fiadzomor, D., Saelao, P., Wang, Y., Kelly, T.R., Gallardo, R., Dekkers, J.C.M., Lamont, S.J., Zhou, H., and Kayang, B.B. 2022. Response of three local chicken ecotypes of Ghana to lentogenic and velogenic Newcastle disease virus challenge. Tropical Animal Health and Production 54:134. doi.org/10.1007/s11250-022-03124-8

Xu H, Krieter AL, Ponnuraj N, Tien YY, Kim T, Jarosinski KW*. 2022. Coinfection in the host can result in functional complementation between live vaccines and virulent virus. Virulence 13(1);980. https://doi.org/10.1080/21505594.2022.2082645

Zhang, C., Zuo, Q., Wang, M., Chen, H., He, N., Jin, J., Li, T., Jiang, J., Yuan, X., Li, J., Shi, X., Zhang, M., Bai, H., Zhang, Y., Xu, Q., Cui, H., Chang, G., Song, J., Sun, H., Zhang, Y., Chen, G., and Li, B. (2021) Narrow H3K4me2 is required for chicken PGC formation. J Cell Physiol 236, 1391-1400

Zhang, J., R. M. Goto, C. F. Honaker, P. B. Siegel, R. L. Taylor, Jr., H. K. Parmentier, and M. M. Miller. 2022.  Association of MHCY genotypes in lines of chickens divergently selected for high or low antibody response to sheep red blood cells. Poult. Sci. 101:101621 https://doi.org/10.1016/j.psj.2021.101621

Zhang, J., R. M. Goto, A. Psifidi, M. P. Stevens, R. L. Taylor, Jr., and M. M. Miller. 2022. Research Note: MHCY haplotype and Campylobacter jejuni colonization in a (Line N x Line 61) x Line N backcross population.  Poult. Sci. 101:101654 https://doi.org/10.1016/j.psj.2021.101654

Zhao R, Zuo Q, Yuan X, Jin K, Jin J, Ding Y, Zhang C, Li T, Jiang J, Li J, Zhang M, Shi X, Sun H, Zhang Y, Xu Q, Chang G, Zhao Z, Li B, Wu X, Zhang Y, Song J, Chen G, Li B. Production of viable chicken by allogeneic transplantation of primordial germ cells induced from somatic cells. Nat Commun. 2021 May 20;12(1):2989. DOI: 10.1038/s41467-021-23242-5. PMID: 34017000; PMCID: PMC8138025.

 

Abstracts

Abraham, M., M. Erasmus, G. Fraley, G. F. Erf, and D. Karcher. 2022. Understanding stress and welfare of laying pullets using stock density and feeder space stressors. American Association of Pathologists.

Beck, C. N., J. Santamaria, M. A. Sales, and G. F. Erf. 2022. Primary and secondary immune responses in Light-brown Leghorn pullets vaccinated with Salmonella vaccines. International Poultry Scientific Forum, Atlanta January 2022. accepted

Beck, C. N., J. Santamaria, M. A. Sales, and G. F. Erf. 2022. Local mRNA expression of cytokines during the first seven days following the intradermal administration of autogenous Salmonella vaccines in previously vaccinated Light-brown Leghorn pullets. Poult. Sci. 101 (E-Suppl. 1).

Beck, C. N., J. Santamaria, M. A. Sales, and G. F. Erf. 2022. Local cellular- and systemic humoral-responses to intradermal injection of killed autogenous Salmonella vaccines in immunized and non-immunized Light-brown Leghorn pullets. International Avian Immunology Research Group Meeting, September 26-29, 2022, Newark, DE.

Blue CEC, Emami NK, White MB, Gutierrez O, Cantley S, and Dalloul RA. Effects of Quillaja saponaria extract on mRNA abundance of tight junction proteins and cellular metabolism genes during a necrotic enteritis challenge in broilers. International Poultry Scientific Forum. 2022.

Blue CEC, Emami NK, Gutierrez O, Cantley S, and Dalloul RA. Effects of Clarity Q on mRNA abundance of nutrient transporters during a subclinical necrotic enteritis. Poultry Science Association Annual Meeting. 2022.

Emami NK, and Dalloul RA. Comparison of two Clostridium perfringens strains for inducing subclinical necrotic enteritis in broiler chickens. International Poultry Scientific Forum. 2022.

Emami NK, Fenster DA, Blue CEC, and Dalloul RA. Differential analysis of breast muscle and liver mRNA in broiler chickens challenged with Eimeria maxima with/without Clostridium perfringens. World Poultry Congress. 2022.

Emami NK, Fuller AL, and Dalloul RA. Lateral Transmission of Histomonas meleagridis in turkey poults raised on floor pens. World Poultry Congress. 2022.

Froebel LE, Emami NK, and Dalloul RA. Evaluation of circulatory mRNA abundance of pro-inflammatory and regulatory cytokines and receptors during a subclinical necrotic enteritis challenge. International Poultry Scientific Forum. 2022.

Froebel LE, and Dalloul RA. Evaluating mRNA abundance of cytokines and chemokines in the modern broiler and heritage breed during a necrotic enteritis challenge. Poultry Science Association Annual Meeting. 2022.

Fulton. J. E. W. Drobik-Czwarno, A. Wolc, C. Schmidt, and R. L. Taylor, Jr. 2022.  Identification of the Genes Responsible for the Chicken A and E Blood Group Systems. Plant and Animal Genome PAG PAG XXIX 2022 https://pag.confex.com/pag/xxix/meetingapp.cgi/Paper/45612

Ng, TT, Hawkins, RD, and Drechsler, Y. An update on transcriptome of an array of chicken ovary, intestinal, and immune cells and tissues. Poultry Science Association. July 11th to 14th, 2022. San Antonio, Texas.

Patria, Joseph, Nirajan Bhandari, Phaedra Travlarides-Hontz, Benedikt B. Kaufer, and Mark S. Parcells. Marek’s disease virus (MDV) evolution of virulence: Investigating the selection for protein binding interfaces at the C-terminus of the Meq oncoprotein. Proceedings of 94th Annual Northeastern Conference on Avian Diseases (NECAD) Penn State University, Sept. 14 and 15, 2022 

Parcells, M.S., Katneni, U.K., Neerukonda, S., Tavlarides-Hontz, P., Arsenault, R.J. Cell culture and In Vivo Examination of the Mechanism of Action of Victrio a DNA-Liposome-based Innate Immune Agonist. 18th International Conference on Production Diseases in Farm Animals; 2022 June 15–17; Madison, WI

Perry, F., Bortoluzzi, C., Eyng, C., Aeschleman, L., Jones, E., Kogut, M., Arsenault, R., The immunometabolic effects of butyrate in chicken small intestines and macrophage-like cells. World Poultry Congress; 2022 August 8-11; Paris, France

Perry, F., Bortoluzzi, C., Eyng, C., Kogut, M., Arsenault, R. The immunometabolic effects of sodium butyrate supplementation in the ileum of broiler chickens. Poultry Science Association Annual Meeting; 2022 July 1-14; San Antonio, TX.

Perry F., Bortoluzzi, C., Lahaye, L., Santin, E., Johnson, C., Korver, D.R., Kogut, M.H., Arsenault R.J. Protected Biofactors and Antioxidants Reduce the Negative Consequences of Virus and Cold Challenge while Enhancing Performance by Modulating Immunometabolism through Cytoskeletal and Immune Signaling. Symposium on Gut Health in Production of Food Animals; 2021 November 1-3; St. Louis, MO.

Runcharoon K, Emami NK, and Dalloul RA. Differential analysis of autophagy-related genes in broilers challenged with Eimeria maxima with or without Clostridium perfringens. Poultry Science Association Annual Meeting. 2022.

Santamaria, J., C. N. Beck, M. A. Sales, and G. F. Erf. 2022. Local and systemic inflammatory and antibody responses to intradermal administration of killed Salmonella Vaccine in different vaccine vehicles. Poult. Sci. 101 (E-Suppl. 1).

Shaimaa K. Hamad, Shuja Majeed, Ali Nazmi. Characterization of Intestinal Immune Responses to Coccidiosis in Chicken. 2022 Food for Health Discovery Annual Meeting. Columbus OH

Sparling, B. and Drechsler, Y. Talk. An update on chicken transcriptome and epigenome annotation, factors involved in host resistance against IBV; and establishing Ig-like receptors' role in innate immunity. NE-1834 Genetic Bases for Resistance and Immunity to Avian Diseases. September 17-19, 2021. Baltimore, Maryland.

Sparling, B. and Drechsler, Y. Talk. Identification of immunoglobulin-like receptors in the chicken genome that are associated with disease resistance. January 8, 2022. Plant and Animal Genome Conference. San Diego, CA.

Sparling, B. and Drechsler, Y. Talk. Advances in identifying immunoglobulin-like receptors and their roles in immunity in the chicken. Western University of Health Sciences, College of Veterinary Medicine, 2022 CVM Research Day. March 28, 2022. Pomona, California.

Sparling, B. and Drechsler, Y. Talk. Determining chicken immunoglobulin-like receptors (CHIRs) expression and their effect on immune response in a macrophage disease model. American Association of Immunologists. May 6-9, 2022. Portland, Oregon.

Taylor, R. L., Jr., W. Drobik-Czwarno, and J. E. Fulton. 2022.  Chicken alloantigen D is CD99. Poult. Sci. 101: (E-Suppl 1) in press

Taylor, R. L., Jr., W. Drobik-Czwarno, and J. E. Fulton. 2022.  Identifying chicken alloantigens A, E and D. AIRG meeting in press

 

Book Chapters

Lamont, S.J., Dekkers, J.C.M., Wolc, A. and Zhou, H. 2022. Immunogenetics and the mapping of immunological functions. Pp. 277-297. In: Avian Immunology, 3rd ed. B. Kaspers, K.A. Schat, T. Goebel, L. Vervelde, Eds., Elsevier, London, San Diego, Cambridge, Oxford. Doi.org/10.1016/C2018-0-00454-5.

 

Thesis/Dissertation

Ye Bi, M.S. Animal Biology. Longitudinal Analysis of CD4 and CD8 T Cell Receptor Repertoires Associated with Newcastle Disease Virus Infection in Layer Birds

“The Regulation and Role of Glycoprotein C during Herpesvirus Pathogenesis.” Widaliz Vega Rodriguez, PhD Dissertation 2022. University of Illinois at Urbana-Champaign. Supervisor: Keith W. Jarosinski

EVALUATING THE ROLE OF IRG1 AND ITACONATE ON MAREK’S DISEASE VIRUS INFECTION, Kristy Wisser-Parker, MS in Biological Sciences (defense date June xx, 2022)

THE ROLE OF EXOSOMES IN MAREK’S DISEASE VIRUS VACCINE RESPONSE, Aksana Dallakoti, non-thesis MS in Bioinformatics (defense date August 22, 2022)

INFECTION DYNAMICS OF A CHICKEN T-CELL LINE BY DIFFERENT PATHOTYPES OF MAREK’S DISEASE VIRUS (MDV), Joshua Miller, MS in Biological Sciences (defense date August 26, 2022)

White, Mallory B.  In ovo and feed application of probiotics or synbiotics and response of broiler chicks to post-hatch necrotic enteritis. PhD Dissertation, August 2021.

Froebel, Laney E.  Evaluating immune related genes in heritage and modern broiler breeds and macrophages in response to clostridium perfringens. MS, July 2022.

10/12/2023

Publications

Peer Reviewed Publications

Cotter PF, 2023. Bone Marrow and Blood Pictures of Broilers with BCO. J Anim Res Vet Sci 2023, 7: 048 DOI: 10.24966/ARVS-3751/100048

Cotter PF, 2022. Cytogenetics of reactive bone marrow associated with a fungal infection (Hemomycetes avium) of ducklings. World J Vet Sci 4: 1018

Cotter PF, 2022. Stress assessment by the hemogram method - circulating cells complicating reliance on heterophil/lymphocyte (H/L) ratio. J Vet Med Res 9(1): 1224. DOI:10.47739/veterinarymedicine-1224

Cotter PF, 2022. A microscopic study of the morphology of reactive thrombocytes of the duckling. J. World Poult. Res. 12(3). https://dx.doi.org/10.36380/jwpr.2022.16

Cotter P, 2022. The Cytology of Resting and Reactive NK Cells of Chickens. Asian Journal of Research in Animal and Veterinary Sciences, 5(4), 329-338. https://journalajravs.com/index.php/AJRAVS/article/view/222

Fries-Craft, K., Lamont, S.J., Bobeck, E.A. 2023. Implementing real-time immunometabolic assays and immune cell profiling to evaluate systemic immune response variations to Eimeria challenge in three novel layer genetic lines. Front. Vet. Sci.  DOI 10.3389/fvets.2023.1179198

Pritchett, E.,M., Van Goor, A., Schneider,  B.K., Young, M., Lamont, S.J., Schmidt, C.K. 2023. Chicken pituitary transcriptomic responses to acute heat stress. Mol. Biol. Rep. doi.org/10.1007/s11033-023-08464-8

Pacheco Santana, T., Gasparino, E., De Souza Khatlab, A., Favaro Elias Pereira, A.M., Teixeira Barbosa, L., Pereira Miranda Fernandes, R., Lamont, S.J., Del Vesco, A.P. 2023. Effects of maternal methionine supplementation on the response of Japanese quail (Coturnix coturnix japonica) chicks to heat stress. J Anim.Sci. doi.org/10.1093/jas/skad042

Warren, W.C., Rice, E.S., Meyer, A., Hearn, C.J., Steep, A., Hunt, H.D., Monson, M.S., Lamont, S.J., Cheng, H.H. 2023. The immune cell landscape and response of Marek’s disease resistant and susceptible chickens infected with Marek’s disease virus. Scientific Rep. 13:5355. doi.org/10.1038/s41598-023-32308-x

Wang, Y., Saelao, P., Kern, C., Zhao, B., Gallardo, R.A., Kelly, T., Dekkers, J.M., Lamont, S.J., Zhou, H. 2023. Distinct Hypothalamus and Breast Muscle Transcriptomic Response to Heat Stress under Newcastle Disease Virus Infection.  Cytogenet. Genome Res. DOI.org/10.1159/000529376

Smith J., Alfieri, J.M., Anthony, N., Arensburger, P., Athrey, G.N., Balacco, J., Balic, A., Bardou, P., Barela, P., Bigot, Y., Blackmon, H., Borodin, P.M., Rachel Carroll, R., Casono, M.C., Charles, M., Cheng, H., Chiodi, M., Cigan, L., Coghill, L.M., Crooijmans, R., Neelabja Das, N., Davey, S., Davidian, A., Degalez, F., Dekkers, J.M., Derks, M., Diack, A.B., Djikeng, A., Drechsler, Y., Dyomin, A., Fedrigo, O., Fiddaman, S.R., Giulio Formenti, G., Frantz, L.A.F., Fulton, J.E., Gaginskaya, E., Galkina, S., Gallardo, R.A., Geibel, J., Gheyas, A., Godinez, C.J.P., Goodell, A., Graves, J.A.M., Griffin, D.K., Haase, B., Han, J.-L., Hanotte, O., Henderson, L.J., Hou, Z.-C., Howe, K., Huynh, L., Ilatsia, E., Jarvis, E., Johnson, S.M., Kaufman, J., Kelly, T., Kemp, S., Kern, C., Keroack, J.H., Klopp, C., Lagarrigue, S., Lamont, S.J., Lange, M., Lanke, A., Larkin, D., Larson, G., Layos, J.K.N., Lebrasseur, O., Malinovskaya, L.P., Martin, R.J., Martin Cerezo, M.L., Mason, A.S., McCarthy, F.M., McGrew, M.J., Mountcastle, J., Kamidi Muhonja, C., Muir, W., Muret, K.,  Murphy, T., Ng’ang’a, I., Nishibori, M., O’Connor, R.E., Ogugo, M., Okimoto, R., Ouko, O., Patel, H.R., Perini, F., María Pigozzi, M., Potter, K.C., Price, P.D., Reimer, C., Rice, E.S., Rocos, N., Rogers, T.F., Saelao, P., Schauer, J., Schnabel, R., Schneider, V., Simianer, H., Smith, A., Stevens, M.P., Stiers, K., Keambou Tiambo, C., Tixier-Boichard, M., Torgasheva, A.A., Tracey, A., Tregaskes, C.A., Vervelde, L., Wang, Y., Warren, W.C., Waters, P., Webb, D., Weigend, S., Wolc, A., Wright, A.E., Wright, D., Wu, Z., Yamagata, M., Yang, C., Yin, Z.-T., Young, M.C., Zhang, G., Zhao, B., Zhou, H.  2023. Fourth Report on Chicken Genes and Chromosomes 2022. Cytogenet. Genome Res. 162:405–527. DOI.org/10.1159/000529376

Walugembe, M., Naazie, A., Mushi, J.S., Akwoviah, G.A., Mollel, E., Mang'enya, J.A., Wang, Y., Chouicha, N., Kelly, T., Msoffe, P.L.M. Otsyina, H.R., Gallardo, R.A., Lamont, S., Muhairwa, A.P., Kayang, B.B., Zhou, H., Dekkers, J.C.M. 2022. Genetic analyses of response of local Ghanaian and Tanzanian chicken ecotypes to a natural challenge with velogenic Newcastle disease virus. Animals 12:2755. doi.org/10.3390/ani12202755

Fulton. J. E. W. Drobik-Czwarno, A. Wolc, A. M. McCarron, A.R. Lund, C. J. Schmidt and R. L. Taylor, Jr. 2023. CD99 and the chicken alloantigen D blood system. Genes 14:402 https://doi.org/10.3390/genes14020402

He, Y., R. L. Taylor, Jr., H. Bai, C. M. Ashwell, K. Zhao, Y. Li, G. Sun, H. Zhang, and J. Song. 2023. Transgenerational epigenetic inheritance and immunity in chickens that vary in Marek's disease resistance. Poult. Sci. 102: 103036 https://doi.org/10.1016/j.psj.2023.103036

Nolin, S. J., C. M. Ashwell, R. L. Taylor, Jr., P. B. Siegel, and F. W. Edens. 2023. Combining supervised machine learning with statistics reveals differential gene expression patterns related to energy metabolism in the jejuna of chickens divergently selected for antibody response to sheep red blood cells. Poult. Sci. 102:102751 https://doi.org/10.1016/j.psj.2023.102751

Taylor, R. L., Jr. and M. H. Kogut. 2023. Editorial: Poultry Science manuscript preparation. Poult. Sci. 102:1102732 https://doi.org/10.1016/j.psj.2023.102732

Taylor, R. L., Jr. and M. H. Kogut. 2023. Editorial: Poultry Science manuscript revision. Poult. Sci. 102:102982 https://doi.org/10.1016/j.psj.2023.102982

Cason, E. E., Al Hakeem, W. G., Adams, D., Shanmugasundaram, R., & Selvaraj, R. (2022). Effects of synbiotic supplementation as an antibiotic growth promoter replacement on cecal Campylobacter jejuni load in broilers challenged with C. jejuni. Journal of Applied Poultry Research, 100315. doi:10.1016/j.japr.2022.100315

Akerele, G., Al Hakeem, W. G., Lourenco, J., & Selvaraj, R. K. (2022). The Effect of Necrotic Enteritis Challenge on Production Performance, Cecal Microbiome, and Cecal Tonsil Transcriptome in Broilers. PATHOGENS, 11(8), 16 pages. doi:10.3390/pathogens11080839

Acevedo-Villanueva, K., Akerele, G., Al-Hakeem, W., Adams, D., Gourapura, R., & Selvaraj, R. (2022). Immunization of Broiler Chickens With a Killed Chitosan Nanoparticle Salmonella Vaccine Decreases Salmonella Enterica Serovar Enteritidis Load. FRONTIERS IN PHYSIOLOGY, 13, 18 pages. doi:10.3389/fphys.2022.920777

Fathima, S., Shanmugasundaram, R., Adams, D., & Selvaraj, R. K. (2022). Gastrointestinal Microbiota and Their Manipulation for Improved Growth and Performance in Chickens. FOODS, 11(10), 30 pages. doi:10.3390/foods11101401

Al Hakeem, W. G., Fathima, S., Shanmugasundaram, R., & Selvaraj, R. K. (n.d.). Campylobacter jejuni in Poultry: Pathogenesis and Control Strategies. Microorganisms, 10(11), 2134. doi:10.3390/microorganisms10112134

Fathima, S., Hakeem, W. G. A., Shanmugasundaram, R., & Selvaraj, R. K. (n.d.). Necrotic Enteritis in Broiler Chickens: A Review on the Pathogen, Pathogenesis, and Prevention. Microorganisms, 10(10), 1958. doi:10.3390/microorganisms10101958

Yanghua He, Robert L. Taylor, Hao Bai, Christopher M. Ashwell, Keji Zhao, Yaokun Li, Guirong Sun, Huanmin Zhang, Jiuzhou Song, Transgenerational epigenetic inheritance and immunity in chickens that vary in Marek's disease resistance, Poultry Science, 2023, 103036, ISSN 0032-5791, https://doi.org/10.1016/j.psj.2023.103036

Pan Z, Y. Wang, M. Wang, Y. Wang, X. Zhu, S. Gu, C. Zhong, L. An, M. Shan , J. Damas, M. M. Halstead, D. Guan, N. Trakooljul, K. Wimmers, Y. Bi, S. Wu, M. E. Delany, X. Bai, H.H. Cheng, C. Sun, N. Yang, X. Hu, H. A Lewin,  L. Fang, H. Zhou. 2023. An atlas of regulatory elements in chicken: a resource for chicken genetics and genomics. Science Advances 9,eade1204(2023).DOI:10.1126/sciadv.ade1204.

Zhang J, Goto RM, Miller MM.  2020.  A simple means for chicken MHC-Y genotyping using short tandem repeat sequences.  Immunogenetics 72:325-332. doi: 10.1007/s00251-020-01166-6.  PMID: 32488290.

Zhang J, Goto RM, Honaker CF, Siegel PB, Taylor RL Jr, Parmentier HK, Miller MM.  2021a.  Association of MHCY genotypes in lines of chickens divergently selected for high or low antibody response to sheep red blood cells.  Poult Sci. 101(3):101621. doi: 10.1016/j.psj.2021.101621.  PMID: 34995879.

Zhang J, Goto RM, Psifidi A, Stevens MP, Taylor RL Jr, Miller MM.  2021b.  Research Note: MHCY haplotype impacts Campylobacter jejuni colonization in a backcross [(Line 61 x Line N) x Line N] population.  Poult Sci. 101(3):101654. doi: 10.1016/j.psj.2021.101654.  PMID: 35007930.

Goto RM, Warden CD, Shiina T, Hosomichi K, Zhang J, Kang TH, Wu X, Glass MC, Delany ME, Miller MM. 2022.  The Gallus gallus RJF reference genome reveals an MHCY haplotype organized in gene blocks that contain 107 loci including 45 specialized, polymorphic MHC class I loci, 41 C-type lectin-like loci, and other loci amid hundreds of transposable elements. G3 (Bethesda). 2022 Nov 4;12(11):jkac218. doi: 10.1093/g3journal/jkac218. PMID: 35997588.

Gugiu GB, Goto RM, Bhattacharya S, Delgado MK, Dalton J, Balendiran V, Miller MM. Mass spectrometry defines lysophospholipids as ligands for chicken MHCY class I molecules. J Immunol. 2023 Jan 1;210(1):96-102. doi: 10.4049/jimmunol.2200066. PMID: 36427007.

2023. Buter, A. Feberwee, Sjaak de Wit, A. Heuvelink, A. P. da Silva, R. A. Gallardo, E. Soriano Vargas, J. Verwey, A. Jung, M. Tödte, R. Dijkman. Molecular characterization of the HMTp210 gene of Avibacterium paragallinarum and the proposition of a new genotyping method as alternative for classical serotyping. 2023. Avian Pathology. Accepted


2024. Jude*, B. Jordan*, A. Muller-Slay, R. Luciano, A. P da Silva, R. A. Gallardo*. Mitigation of False Layer Syndrome Through Maternal Antibodies Against Infectious Bronchitis Virus. 2023. Avian Diseases. Submitted

Botchway ,P.K., Amuzu-Aweh, E.N., Naazie, A., Aning, G. K., Otsyina, H.R., Saelao, P., Wang, Y., Zhou, H., Walugembe, M., Dekkers, J., Lamont, S.J., Gallardo, R.A., Kelly, T.R., Bunn, D. and Kayang, B.B. 2022. Host response to successive challenges with lentogenic and velogenic Newcastle disease virus in local chickens of Ghana. Poultry Science 101:102138. doi.org/10.1016/j.psj.2022.102138

J.B. Tsaxra, R.A. Gallardo*, C. Abolnik, A. Chengula, P. M. Msoffe, A. P. Muhairwa, T. Phiri, J.R. Mushi, N. Chouicha, E.L. Mollel, H. Zhou*, and T.R. Kelly. Spatio-temporal Patterns and Prevalence of Newcastle Disease Virus at Mawenzi Live Bird Market in Morogoro Municipality, Tanzania. Transboundary and emerging diseases. Submitted. 2023.

J.B. Tsaxra, R.A. Gallardo*, C. Abolnik, R. Jude*, A. Chengula, P. M. Msoffe, A. P. Muhairwa, T. Phiri, J.R. Mushi, N. Chouicha, E.L. Mollel, H. Zhou*, and T.R. Kelly. Spatio-temporal Patterns and Prevalence of Newcastle Disease Virus at Mawenzi Live Bird Market in Morogoro Municipality, Tanzania. Tropical animal health and production. Submitted. 2023.

2023. Ramsubeik, S. Stoute, R.A. Gallardo*, B. Crossley, D. Rejmanek, R. Jude*, C. Jerry. Infectious bronchitis virus California variant CA1737 isolated from a commercial layer flock with cystic oviducts and poor external egg quality. Avian Diseases. 2023. Accepted


2024. Jude*, A.P. Da Silva, D. Rejmanek, H.L. Shivaprasad, S. Stoute, C. Jerry, R.A. Gallardo*. Whole genome sequence of a novel genotype VIII infectious bronchitis virus isolated from California layers in 2021. ASM Microbiology Resource Announcements. 2023. Submitted.

He, H., Genovese, K.J., Arsenault, R.J., Swaggerty, C.L., Johnson, C.N., Byrd, J.A., Kogut, M.H. M2 polarization and inhibition of host cell glycolysis contributes intracellular survival of Salmonella strains in chicken macrophage HD-11 cells. 2023. Microorganisms. 11 (7).

Johnson, C.N., Arsenault, R.J., Piva, A., Grilli, E., and Swaggerty, C.L. A microencapsulated feed additive containing organic acids and botanicals has a distinct effect on proliferative and metabolic related signaling in the jejunum and ileum of broiler chickens. 2023. Frontiers in Physiology. 14, 474.

Giovagnoni, G., Perry, F., Tugnoli, B., Piva, A., Grilli, E., Arsenault, R.J. A comparison of the immunometabolic effect of antibiotics and plant extracts in a chicken macrophage-like cell line during a Salmonella Enteritidis challenge. 2023. Antibiotics. 12(2), 357

Fries-Craft, K., Arsenault, R.J., & Bobeck, E. A. Basal diet composition contributes to differential performance, intestinal health, and immunological responses to a microalgae-based feed ingredient in broiler chickens. 2023. Poultry Science. 102(1), 102235.

Perry, F., Lahaye, L., Santin, E., Johnson, C., Korver, D.R., Kogut, M.H., and Arsenault, R.J. Protected Biofactors and Antioxidants Reduce the Negative Consequences of Virus and Cold Challenge while Enhancing Performance by Modulating Immunometabolism through Cytoskeletal and Immune Signaling in the Jejunum. 2022. Poultry Science. 101(12), p 102172.

Garcia G Jr, Irudayam JI, Jeyachandran AV, Dubey S, Chang C, Castillo Cario S, Price N, Arumugam S, Marquez AL, Shah A, Fanaei A, Chakravarty N, Joshi S, Sinha S, French SW, Parcells MS, Ramaiah A, Arumugaswami V. Innate immune pathway modulator screen identifies STING pathway activation as a strategy to inhibit multiple families of arbo and respiratory viruses. Cell Rep Med. 2023 May 16;4(5):101024. doi: 10.1016/j.xcrm.2023.101024. Epub 2023 Apr 28. PMID: 37119814; PMCID: PMC10213809.

Garcia G Jr, Irudayam JI, Jeyachandran AV, Dubey S, Chang C, Cario SC, Price N, Arumugam S, Marquez AL, Shah A, Fanaei A, Chakravarty N, Joshi S, Sinha S, French SW, Parcells M, Ramaiah A, Arumugaswami V. Broad-spectrum antiviral inhibitors targeting pandemic potential RNA viruses. bioRxiv [Preprint]. 2023 Jan 20:2023.01.19.524824. doi: 10.1101/2023.01.19.524824. Update in: Cell Rep Med. 2023 May 16;4(5):101024. PMID: 36711787; PMCID: PMC9882367.

Kaufer BB, Parcells MS, Bertzbach LD. A Special Issue on Marek's Disease Virus-The Editors' View. Microorganisms. 2023 Mar 21;11(3):805. doi: 10.3390/microorganisms11030805. PMID: 36985378; PMCID: PMC10057323.

Blue CEC, Emami NK, White MB, Cantley S, and Dalloul RA. 2023. Inclusion of Clarity Q manages growth performance, immune response, and nutrient transports of broilers during subclinical necrotic enteritis. Microorganisms 11(8):1894.

Henschen AE, Vinkler M, Langager MM, Rowley AA, Dalloul RA, Hawley DM, and Adelman JS. 2023. Rapid adaptation to a novel pathogen through disease tolerance in a wild songbird. PLoS Pathogens 19(6):e1011408.

Emami, NK, Fuller AL, and Dalloul RA. 2022. Lateral transmission of Histomonas meleagridis in turkey poults raised on floor pens. Poultry Science 101(7):101951.

Weitzman CL, Belden LK, May M, Langager MM, Dalloul RA, and Hawley DM. 2022. Antibiotic perturbation of gut bacteria does not significantly alter host responses to ocular disease in a songbird species. PeerJ 10:e13559.

Brandi A. Sparling, Theros T. Ng, Anaid Carlo-Allende, Fiona M. McCarthy, Robert L. Taylor, Jr., Yvonne Drechsler: Immunoglobulin-like Receptors in Chickens: identification, functional characterization, and renaming to Cluster Homolog of Immunoglobulin-like Receptors. Poultry science. Submitted.

 

 

Abstracts

Swaggerty, C. L., C. N. Johnson, C. F. Honaker, P. B. Siegel, C. M. Ashwell, and R. L. Taylor, Jr. 2023. Chickens selected for high and low antibody responses to sheep red blood cells exhibit different cytokine and chemokine expression in peripheral blood leukocytes and the spleen. Poult. Sci. 102(E-Suppl. 1): in press

Taylor, R. L., Jr., P. B. Siegel, C. F. Honaker, H. Parmentier, A. Wolc, C. M. Ashwell, and J. E. Fulton. 2023. Selection for antibody response against sheep red blood cells (SRBC) altered alloantigen frequencies in Virginia and Wageningen genetic stocks. Poult. Sci. 102(E-Suppl. 1): in press

Taylor, R. L., Jr.,W. Drobik-Czwarno, A. Wolc, and J. E. Fulton. 2022. Identifying chicken alloantigen candidate genes. Proc. Avian Immunology Research Group (AIRG) Meeting XVI, Newark, DE, p. 17

Taylor, R. L., Jr., W. Drobik-Czwarno, A. Wolc and J. E. Fulton. 2022. Chicken alloantigen D is CD99. Poult. Sci. 101(E-Suppl. 1):154-155

Al Hakeem, W., Lourenco, J., Cason, E., Adams, D., villanueva, K., Fathima, S., . . . Selvaraj, R. (2023). The effect of Campylobacter jejuni challenge on the ileal microbiota and short-chain fatty acids concentration in broilers. INTERNATIONAL POULTRY SCIENTIFIC FORUM

Shah, B., Al Hakeem, W., Fathima, S., Shanmugasundaram, R., & Selvaraj, R. (2023). Effect of synbiotic supplementation on production performance and necrotic enteritis severity in broilers under an experimental necrotic enteritis challenge. International Poultry Science Forum

Fathima, S., Al Hakeem, W., Shah, B., Shanmugasundaram, R., & Selvaraj, R. (2023). Effect of arginine supplementation on production performance and inflammatory response in broilers during necrotic enteritis challenge. International Poultry Science Forum

Acevedo-Villanueva, K., Renu, S., Gourapura, R., & Selvaraj, R. (2022). Salmonella chitosan nanoparticle vaccine administration is protective against Salmonella Enteritidis in broiler birds. Poult. Sci. 100 (E-Suppl 1)

Selvaraj, R., Shanmugasundaram, R., & Applegate, T. (2022). Effect of Bacillus subtilis and Bacillus licheniformis probiotic supplementation on performance and Campylobacter jejuni load in broilers challenged with C. jejuni. Poult. Sci. 100 (E-Suppl 1).

Song, J. Temporal Expression of immune organs in Marek’s disease. XVI Avian Immunology Research Group Meeting University of Delaware, August 26-28, 2022

Egana-Labrin. Molecular characterization of infectious bursal disease virus (IBDV) circulating in the Delmarva region between 2019-2023. 2023 American Association of Avian Pathologists (AAAP) meeting, Jacksonville, Florida.

Khalid Z, Pietruska A, Chowdhury E, Hauck R (2023): Influence of avian reovirus infection on the intestinal microbiome. In: Abstracts of the International Poultry Scientific Forum, Atlanta, GA. p 18.

Khalid Z, Conrad S, Alvarez-Narvaez S, Harrell TL, Chowdhury E, Hauck R (2023): Systemic invasiveness and pathogenicity of an avian reovirus field isolate compared to a reference strain after oral inoculation. Presentation at the Meeting of the American Association of Avian Pathologists, Jacksonville, FL.

Arsenault, R. J. Postbiotics: a metabolic and immune gut health feed additive. Poultry Federation Annual Nutrition Conference, 2023, August 29-31; Little Rock, AR.

Giovagnoni, G., Perry, F., Tugnoli, B., Piva, A., Arsenault, R., Grilli, E. The immunometabolic role of a thymol-based blend of botanicals on chicken macrophage-like cells challenged with Salmonella Enteritidis. Poultry Science Association Annual Meeting; 2023 July 10-13; Philadelphia, PA.

Arsenault, R.J. Unveiling the secrets of kinome analysis. Vetagro Satellite Symposium (ESPN 2023), 2023, June 21; Rimini, Italy.

Johnson, C., Arsenault, R., Grilli, E., Piva, A., Swaggerty, C. A microencapsulated feed additive containing organic acids and botanicals has a distinct effect on proliferative and metabolic related signaling in the jejunum and ileum of broiler chickens. 23rd European Symposium on Poultry Nutrition; 2023 June 21-24; Rimini, Italy.

Giovagnoni, G., Tugnoli, B., Johnson, C., Piva, A., Arsenault, R., Swaggerty, C., Grilli, E. A microencapsulated thymol-based blend of botanicals can clear Salmonella Enteritidis in contrast to common in-feed antibiotics in broilers. 23rd European Symposium on Poultry Nutrition; 2023 June 21-24; Rimini, Italy.

Perry, F., Bortoluzzi, C., Elango, J.N., James, A., Jones, E., Eyng, C., Kogut, M., Arsenault, R. Butyrate affects chicken monocyte-like cell cycle progression. International Poultry Scientific Forum; 2023 January 23-34; Atlanta, GA.

Arsenault, R.J. Determining immunometabolic markers of gut health and the mechanism of action for challenges and treatments using kinome and molecular analysis. Kemin Intestinal Health Symposium. 2022, October 12-14, Palm Springs, CA

Giovagnoni, G., Perry, F., Anderson-Coughlin, B., Kniel, K., Tugnoli, B., Grilli, E., Arsenault, R. Digital PCR as a new highly sensitive method in chicken cytokine profiling. Avian Immunology Research Group Meeting; 2022 September 25-28; Newark, DE.

Parcells, M.S., Katneni, U.K., Neerukonda, S., Tavlarides-Hontz, P., Arsenault, R.J. Cell culture and In Vivo Examination of the Mechanism of Action of Victrio®, a DNA-Liposome-based Innate Immune Agonist. Avian Immunology Research Group Meeting; 2022 September 25-28; Newark, DE.

Parcells, M.S. Dallakoti, A., Tavlarides-Hontz, P., Pendarvis, K., Gollhardt, E., Perry, F., Arsenault, R.J. Proteomic analysis of the differentiation of chicken monocyte cell line HD11 into macrophages and dendritic cells. Avian Immunology Research Group Meeting; 2022 September 25-28; Newark, DE.

Mark S. Parcells, Aksana Dallakoti, Sohee Lee, Yaw Kobia Dwomor, Eric Munoz, Matthew B. Hudson, Shannon Modla and Phaedra Tavlarides-Hontz. The Effect of Exosomes from the Serum of Chickens Vaccinated and Protected from Marek’s Disease Virus (MDV) Challenge and MDV-induced Tumor-bearing Chickens on the Proteomes of Chicken Macrophage Cell Line HD11. Proceedings of 95th Annual Northeastern Conference on Avian Diseases (NECAD), 2023, Penn State University. p. 81

Taxonomic and Metabolic Changes in the Animal. 5th Microbiome Movement – Animal Health & Nutrition. Raleigh, NC. October 2022 (International meeting).

Blue CEC, Medina B, Wagner AL, Dalloul RA. Novel natural feed additive efficacy during a clinical necrotic enteritis challenge in broilers. International Poultry Scientific Forum. 2023.

Dong B, Dalloul RA. Establishment of chicken apical-out three-dimensional enteroids. International Poultry Scientific Forum. 2023.

Niraula A, Blue CEC, Fenster DA, Emami NK, Dalloul RA. Assessment of mRNA abundance of key cytokines during histomoniasis in turkey poults in a lateral transmission model. International Poultry Scientific Forum. 2023.

Blue CEC, Froebel LE, Dalloul RA. Evaluating mRNA abundance of host defense peptide genes in heritage and modern broiler breeds during subclinical necrotic enteritis. International Poultry Scientific Forum. 2023.

Niraula A, Fenster DA, Wagner AL, Medina B, Girard I, Fuller AL, and Dalloul RA. Protective effects of Alterna HTS in turkey poults raised in a floor pen lateral transmission model of Histomonas meleagridis. Poultry Science Association Annual Meeting. 2023.

Blue CEC, Wagner AL, Medina B, Girard I, Dalloul RA. Assessment of phytogenic blends on performance and tight junction proteins in broiler chickens during a necrotic enteritis challenge. Poultry Science Association Annual Meeting. 2023.

Dong B, Blue CEC, Regmi P, Ellestad LE, Dalloul RA. In ovo administration and water supplementation of a postbiotic positively influence response of broilers to necrotic enteritis. Poultry Science Association Annual Meeting. 2023.

Marasini H, Dong B, Dalloul RA, Regmi P. Effect of experimental coccidiosis and necrotic enteritis on broiler behavior during open-field test. Poultry Science Association Annual Meeting. 2023.

Fenster DA, Chaney WE, Dalloul RA. Effect of Diamond V Original XPC postbiotic on Salmonella Typhimurium colonization and growth performance in broilers. Poultry Science Association Annual Meeting. 2023.

 

Thesis/Dissertation

Bikas Shah, Synbiotic supplementation as an replacement to antimicrobial growth promoters in broilers challenged with necrotic enteritis challenge. MS. University of Georgia.

Determining the Role of the Conserved Herpesviridae Protein Kinase (CHPK) in Replication and Transmission of Avian Herpesviruses.” Andrea Krieter, PhD Dissertation 2023. University of Illinois at Urbana-Champaign. Supervisor: Keith W. Jarosinski

Wang J, Fenster DA, Vaddu S, Bhumanapalli A, Dalloul RA, Leone C, Singh M, Thippareddi H. Translocation of Salmonella from the gastrointestinal tract to internal organs of broilers. Poultry Science Association Annual Meeting. 2023.

Vaddu S, Singh A, Wang J, Koft B, Mallavarapu B, Subedi D, Bhumanapalli A, Patil P, Dalloul RA, Singh M, Thippareddi H. Effects of Salmonella co-infection with Eimeria maxima and Clostridium perfringens on growth performance and pathogen shedding in broilers. Poultry Science Association Annual Meeting. 2023.

Carlo-Allende,A., Sparling, B., Drechsler, Y. Poster. RNA-interference: role of Ig-like receptor B in chicken macrophage response to AIV and Salmonella typhimurium. August 3rd to 5th, 2023. San Juan, Puerto Rico. https://www.aavmc.org/wp-content/uploads/2023/07/Abstracts_Rev_465.pdf

Sparling, B. and Drechsler, Y. Talk and Conference Proceedings. The chicken cluster homolog of immunoglobulin-like receptor-B molecules plays a suppressive role during avian influenza infection in vitro. Proceedings of the 72nd Western Poultry Disease Conference. March 13-15, 2023. Sacramento, California. Available online at: https://static1.squarespace.com/static/6324cc48a5e67e5d682f1773/t/6400fba0dcae832ad0f98336/1677786028158/WPDC_2023_Proceedings.pdf

Ng, T., Drechsler, Y. Cellular composition and Ig-like Receptors Expression in the Reproductive Tract of the B2B2 and B19B19 chickens. March 6th, 2023.

Sparling, B., Ng, T., and Drechsler, Y. Poster. Improving the cluster homolog of immunoglobulin-like receptor annotation and their implications of expression in innate immune response in different chicken strains. Avian Immunology Research Group Meeting. September 25-28, 2022. Newark, Delaware.

Majeed, S., L. Bielke, A. Nazmi. 2023. Natural Intraepithelial Lymphocytes are critical intestinal mucosal defense against Salmonella Typhimurium Infection in Broiler Chicken. Poultry Science Annual Meeting, Philadelphia, Pennsylvania, USA. Oral presentation

Majeed, S., S.K. Hamad, L. Bielke, A. Nazmi. 2023. The role of Intraepithelial lymphocytes in chicken response to necrotic enteritis. Poultry Science Annual Meeting, Philadelphia, Pennsylvania, USA. Oral presentation

Nazmi, A., S.K. Hamad, S. Majeed. 2023. The role of intestinal intraepithelial lymphocytes in resistance against coccidiosis in chickens. American Association of Immunologist Annual Meeting, Washington DC., USA. Poster presentation