NCCC170: Research Advances in Agricultural Statistics

(Multistate Research Coordinating Committee and Information Exchange Group)

Status: Active

SAES-422 Reports

08/21/2017

Bello, NM, Kramer, M, Tempelman, RJ, Stroup, WW, St-Pierre, NR, Craig, BA, Young, LJ, and Gbur, EE. 2016. Short communication: On recognizing the proper experimental unit in animal studies in the dairy sciences. Journal of Dairy Science 99, 8871-8879. [Article highlighted in Journal of Dairy Sciences as “Best Research Practices”]

 Mohammadi, S., S.S. French, L.A. Neuman-Lee, S.L. Durham, Y. Kojima, A. Mori, E.D. Brodie, Jr., and A. Savitzky 2017. Corticosteroid responses of snakes to toxins from toads (bufadienolides) and plants (cardenolides) reflect differences in dietary specializations. General and Comparative Endocrinology 247, 16-25. doi: 10.1016/j.ygcen.2017.03.015

 Skinner, H.M., A.M. Durso, L.A. Neuman-Lee, S.L. Durham, S.D. Mueller, and S.S. French 2016. Effects of diet restriction and diet complexity on life history strategies in side-blotched lizards (Uta stansburiana). Journal of Experimental Zoology 325(9), 626-637. doi: 10.1002/jez.2056

 Tepedino, V.J., L.C. Arneson, and S.L. Durham 2016. Pollen removal and deposition by pollen- and nectar-collecting specialist and generalist bee visitors to Iliamna bakeri (Malvaceae). Journal of Pollination Ecology 19(8), 50-56.

 Ogata, E.M., W. W. Wurtsbaugh, T.N. Smith, and S.L. Durham 2017. Bioassay analysis of nutrient and Artemia franciscana effects of trophic interactions in the Great Salt Lake, USA. Hydrobiologia 788(1), 1-16. doi: 10.1007/s10750-016-2881-9

 Denlinger, D.S., A.Y. Li, S.L. Durham, P.G. Lawyer, J.L. Anderson, and S.A. Bernhardt 2016. Comparison of in vivo and in vitro methods for blood feeding of Phlebotomus papatasi (Diptera: Psychodidae) in the laboratory. Journal of Medical Entomology 53(5), 1112-1116. doi: 10.1093/jme/tjw074

 Messina, F.J., and S.L. Durham 2015. Loss of adaptation following reversion suggests trade-offs in host use by a seed beetle. Journal of Evolutionary Biology 28, 1882-1891. doi: 10.1111/jeb.12704

 Flint, C.G., X. Dai, D. Jackson-Smith, J. Endter-Wada, S.K. Yeo, R. Hale and M.K. Dolan 2017. Social and Geographic Contexts of Water Concerns in Utah. Society & Natural Resources 30(8), 885 - 902. DOI: 10.1080/08941920.2016.1264653.

 Bushman, B.S., L. Wang, X. Dai, A. Joshi, J.G. Robins and P.G. Johnson. 2016. Responses of Tolerant and Susceptible Kentucky Bluegrass Germplasm to Salt Stress. Hort Science 141(5), 449 - 456.

Hass, Z, DePalma G, Craig, BA, Xu, H, and Sands, LP. 2017. Unmet Need for Help With Activities of Daily Living Disabilities and Emergency Department Admissions Among Older Medicare Recipients. Gerontologist 57(2), 206 - 210.

Rivera, RL, Maulding, MK, Abbott, AR, Craig, BA, and Eicher-Miller, HA. 2016. SNAP-Ed (Supplemental nutrition assistance program-education) increases long-term food security among Indiana households with children in a randomized controlled study. Journal of Nutrition 146(11), 2375 - 2382.

Xavier, A, Muir, WM, Craig, BA, and Rainey, KM. 2016. Walking through the statistical black boxes of plant breeding. Theoretical and Applied Genetics 129(10), 1933-1949.

Osei-Boadi Anguah, K, Lovejoy, JC, Craig, BA, Gehrke, MM, Palmer, PA, Eichelsdoerfer, PE, and McCrory, MA 2017. Can the palatability of healthy, satiety-promoting foods increase with repeated exposure during weight loss? Foods In press.

Cabezòn, FA, Schinckel, AP, Leòn, YL, and Craig, BA. 2017. Analysis of lactation feed intakes for sows with extended lactation lengths. Translational Animal Science. In press.

Gallagher, P, Craig, BA, Luttermoser, T, and Buczkowski, G. 2017.  Paired Competition Analysis using Mixed Models. Proceedings of the Kansas State University Conference on Applied Statistics in Agriculture. In press.

Lakshmikantha H. Channaiaha, Minto Michaelb, Jennifer C. Acuffb, Randall K. Phebusb, Harshavardhan Thippareddic, Maureen Olewnika, George Milliken 2017. Validation of the baking process as a kill-step for controlling Salmonella in muffins. International Journal of Food Microbiology 250(5), 1-6

Michaela A. Schenkelberg, Richard R. Rosenkranz, George A. Milliken, Kristi Menear, David A. Dzewaltowski 2017. Implications of Social Groups on Sedentary Behavior of Children with Autism: A Pilot Study. Journal of Autism and Developmental Disorders 47 (4), 1223–1230.

 Dale E. Bauman, Normand R. St-Pierre, George A. Milliken, Robert J. Collier, Joseph S. Hogan, Jan K. Shearer, K. Larry Smith, William W. Thatcher. 2016. Recombinant bovine somatotropin: Overview and results from a recent meta-analysis of effects on health and welfare of dairy cows. The AABP Proceedings 48, 73-78.

 Channaiah, L.H., E.S. Holmgren, M. Michael, N.J. Sevart, D. Milke, C.L. Schwan, M. Krug, A. Wilder, R.K. Phebus, H. Thippareddi, and G. Milliken. 2016. Validation of baking to control Salmonella serovars in hamburger bun manufacturing, and evaluation of Enterococcus faecium ATCC 8459 and Saccharomyces cerevisiae as nonpathogenic surrogate indicators. Journal of Food Protection. DOI: 10.4315/0362-028X.JFP-15-241.

 Khan S, Jackson RT, Momen B. 2016. The relationship between diet quality and acculturation of immigrated South Asian American adults and their association with metabolic syndrome. PLOS ONE. DOI: 10.1371/journal.pone.0156851.

 Cartwright J, Dzantor EK, Momen B. 2016. Soil microbial community profiles and diversity in limestone cedar glades. CATENA 147, 216-224.

lsen VBK, Momen B, Langsdale S, Galloway G, Link E, Brubaker K, Matthias R, Hill R. 2016. An approach for improving flood risk communication using realistic interactive visualization. Journal of Flood Risk Assessment, DOI: 10.1111/jfr3.12257.

Yu M, Kearney M, Momen B. 2017. Drought associated phenological changes of coastal marshes in Louisiana. Ecosphere. DOI: 10.1002/ecs2.18.

Rogers, C.W., R.J. Norman, T.J. Siebenmorgen, B.C. Grigg, J.T. Hardke, K.R. Brye and E.E. Gbur 2016. Rough rice and milling yields as affected by nitrogen, harvest moisture, and cultivar. Agronomy Journal 108, 813-821.

Chitwood, J., A. Shi, M. Evans, C. Rom, E.E. Gbur, D. Motes, P. Chen and D. Hensley 2016. Effect of temperature on seed germination in spinach (Spinaciaoleracea L.). Hort Science 51, 1475-1478.

Suhartono, M.C. Savin and E.E. Gbur 2016. Genetic redundancy and persistence of plasmid-mediated trimethoprim/sulfamethoxazole resistant effluent and stream water Escherichia coli. Water Research 103, 197-204.

Weeks, W., M.P. Popp, M. Salmeron, L.C. Purcell, E.E. Gbur, F.M. Bourland, N.W. Buehring, L. Earnest, F.B. Fritschi, B.R. Golden, D. Hathcoat, J. Lofton, A.T. McClure, T.D. Miller, C. Neely, G. Shannon, T.K.  Udeigwe, D.V. Verbree, E.D. Vories and W.J. Weibold 2016. Diversifying soybean production risk using maturity group and planting date choices. Agronomy Journal 108, 1917-1929.

Singh, V., N. Burgos, S. Singh, D. Gealy and E. Gbur 2017. Impact of volunteer rice infestation on yield and grain quality of rice. Pest Management Science 73, 604-615. DOI: 10.1002/ps.4343.

Jones, J., M.C. Savin, C.R. Rom and E. Gbur 2017. Denitrifier community response to seven years of ground cover and nutrient management in an organic apple orchard soil. Applied Soil Ecology 112, 60-70.

Burgos, N., Singh, V., S. Singh, H. Black, V. Boyett, S. Basu, D. Gealy, E. Gbur, A. Pereira, R.C. Scott and A. Caicedo 2017. Introgression of ClearfieldTM rice crop traits into weedy red rice outcrosses. Field Crops Research 207, 13-23.

Brennan, R.B., J.T. Scott, A.N. Sharpley, H.T. Lally, H.P. Jarvie, M.J. Bowes, Haggard, M. and E.E. Gbur 2017. Linking soil erosion to instream dissolved P cycling and periphyton growth. Journal of the American Water Resources Association, 1-13. DOI: 10.1111/1752-1688.12534.

Cobb, Adam B., Gail W. T. Wilson, Carla L. Goad, Jeff D. Wilson 2017. Assessing the influence of farm fertility amendments, field management, and sorghum genotypes on soil microbial communities and grain quality. Applied Soil Ecology 119, 367-364. DOI: 10.1016/j.apsoil.2017.06.010.

Basyouni, Rania, B. L. Dunn, Carla Goad 2016. Use of Nondestructive Sensors to Assess Nitrogen Status in Potted Dianthus (Dianthus chinensis L.) Production. Canadian Journal of Plant Science 97(1). DOI: 10.1139/CJPS-2016-0059.

Chang, Dan, Yanqi Wu, Linglong Liu, Shuiyi Lu-Thames, Hongxu Dong, Carla Goad 2016. Quantitative trait mapping for tillering-related traits in two switchgrass populations, The Plant Genome, 9(2). DOI: 10.3835/plantgenome2016.01.0010.

Cobb, Adam B., Gail W. T. Wilson, Carla L. Goad, Scott R. Bean, Rhett C. Kaufman, Thomas J. Herald, Jeff D. Wilson 2016. The role of arbuscular mycorrhizal fungi in grain production and nutrition of sorghum genotypes: Enhancing sustainability through plant-micorbial partnership. Agriculture, Ecosystems & Environment 233, 432-440. http://dx.doi.org/10.1016/j.agee.2016.09.024.

Akehi, K, Long, B, Warren, AJ, Goad, C. 2016. Ankle joint angle and lower leg musculotendinous unit responses to cryotherapy. The Journal of Strength and Conditioning Research 30(9), 2482-92.

Dunn, Bruce L., T. Cavins and C. Goad 2016. Effect of applying calcium chloride and three milk supplements to poinsettia ‘Prestige Red’. Journal of Plant Nutrition 39(1), 45-50. http://dx.doi.org/10.1080/01904167.2015.1086791

Hanzlicek, A. S., J. H. Meinkoth, J. S. Renschler, Carla Goad, L. J. Wheat, 2016. Antigen concentrations as an indicator of clinical remission and disease relapse in cats with histoplasmosis. Journal of Veterinary Internal Medicine 30(4). DOI: 10.111/jvim.13962

Jiang, Li, Bruce Dunn, Yunwen Wang, Carla Goad 2016. Responses to Propagation Substrate and Rooting Hormone Products to Facilitate Asexual Propagation of Silene chalcedonica and Silene coronaria. Journal of Environmental. Horticulture 34(3): 80-83.

Jeger, M. J., Stevenson, K. L., and Madden, L. V. 2017. Plant disease epidemiology. Oxford Bibliographies. http://oxfordbibliographiesonline.com/.  DOI: 10.1093/OBO/9780199830060-0166.

Mila, A. L. and Madden, L. V. 2017. Introduction to Bayesian analysis of Phytopathological data using SAS. Plant Health Instructor. http://www.apsnet.org/edcenter/Pages/phi.aspx. DOI: 10.1094/PHI-A-2017-0603-01.

Thomson, J., K.M. Yeater, L. Zurek, and D. Nayduch 2016. Abundance and accumulation of Escherichia coli and Salmonella Typhimurium procured by male and female house flies (Diptera: Muscidae) exposed to cattle manure. Annals of the Entomological Society of America 110, 37-44.

Crippen, T.L., C.L. Sheffield, J.A. Byrd, J.F. Esquivel, R.C. Beier, and K.M.Yeater 2016. Poultry litter and the environment: Physiochemical properties of litter and soil during successive flock rotations and after remote site deposition. Science of the Total Environment 553, 650-661.

Piccardi, M., R. Macchiavelli, Ariel Capitaine Funes, Gabriel A Bó and Monica Balzarini 2017. Fitting milk production curves through nonlinear mixed models. Journal of Dairy Research 84 (2), 146-153. DOI: https://doi.org/10.1017/S0022029917000085

Flores, C., R. Macchiavelli, O. Bosques, and R. Toledo 2016. Calidad y Estado Fisiológico del Café al momento de la Cosecha y su Efecto en el Rendimiento en Puerto Rico. Journal of Agriculture of the University of Puerto Rico 100: 27-41.

Stevens J.R., Al Masud A., and Suyundikov A. 2017. A comparison of multiple testing adjustment methods with block-correlation positively-dependent tests. PLOS ONE 12(4):e0176124.

Belmont P., Stevens J.R., Czuba J.A., Kumarasamy K., and Kelly S.A. 2016. Comment on ‘Climate and agricultural land use change impacts on streamflow in the upper midwestern United States’ by Satish C. Gupta et al. Water Resources Research 52,7523-7528.

Polejaeva I., Ranjan R., Davies C.J., Regouski M., Hall J., Olsen A.L., Meng Q., Rutigliano H.M., Dosdall D.J., Angel N.A., Sachse F.B., Seidel T., Thomas A.J., Stott R., Panter K.E., Lee P.M., Van Wettere A.J., Stevens J.R., Wang Z., MacLeod R.S., Marrouche N.F., and White K.L. 2016. Increased Susceptibility to Atrial Fibrillation Secondary to Atrial Fibrosis in Transgenic Goats Expressing Transforming Growth Factor-beta1. Journal of Cardiovascular Electrophysiology 27(10),1220-1229.

Ruppert D, Needelman BA, Kleinman PJA, Rabenhorst MC, Momen B, Wester DB. 2017. Hydrology and soil manipulations of iron-rich ditch mesocosms provide little evidence of phosphorus capture within the profile. Journal of Environmental Quality 46, 596-604.

Kivett, J. M., R. A. Cloyd and N. M. Bello 2016. Evaluation of entomopathogenic fungi against Western flower thrips (Thysanoptera: thripidae) under laboratory conditions. Journal of Entomological Science 51(4), 274-291. doi: 10.18474/JES16-07.1

Goncalves, M. A. D., K. M. Gourley, S. S. Dritz, M. D. Tokach, N. M. Bello, J. M. DeRouchey, J. C. Woodworth and R. D. Goodband 2016. Effects of amino acids and energy intake during late gestation of high-performing gilts and sows on litter and reproductive performance under commercial conditions. Journal of Animal Science 95(5), 1993-2003. doi: 10.2527/jas.2015-0087

Martin, E. C., K. Gido, N. M. Bello, W. K. Dodds and A. Veach 2016. Increasing fish taxonomic and functional richness affects ecosystem properties of small headwater prairie streams. Freshwater Biology 61(6), 887-898. doi: 10.1111/fwb.12752.

Becker, M. W., R. P. Sundar, N. M. Bello, R. Alahabi, L. Weatherspoon and L. Bix 2016. Assessing attentional prioritization of front-of-pack nutritional labels using change detection. Journal of Applied Ergonomics 54, 90-99. doi:10.1016/j.apergo.2015.11.014.

Fissekis, S., D. S. Hodgson and N. M. Bello 2017. Effect of cleaning on accuracy and precision of oxygen flow meters on anesthetic machines of various ages. Veterinary Anaesthesia and Analgesia http://dx.doi.org/10.1016/j.vaa.2016.10.002.

Delph, K., E. G. Davis, N. M. Bello, K. Hankins, M. J. Wilkerson, C. Ewen 2017. Comparison of immunologic responses following intranasal and oral administration of a USDA-approved, live-attenuated Streptococcus equi vaccine. Journal of Equine Veterinary Science doi: 10.1016/j.jevs.2016.08.015

Tempelman, R.J. 2016. Editorial: The frontier spirit and reproducible research in animal breeding. Journal of Animal Breeding and Genetics 133, 441-442. doi: 10.1111/jbg.12244.

 Lu, Y., M.J. Vandehaar, D.M. Spurlock, K.A. Weigel, L.E. Armentano, C.R. Staples, E.E. Connor, Z. Wang, M. Coffey,R.F. Veerkamp, Y. de Haas, and R.J. Tempelman 2017.  Modeling genetic and non-genetic variation of feed efficiency and its partial relationships between component traits as a function of management and environmental factors. Journal of Dairy Science 100, 412-427. doi: 10.3168/jds.2016-11491.

 Yao, C., G. de los Campos, M. J. Vandehaar, D.M. Spurlock, L.E. Armentano, M. Coffey, Y. deHaas, R.F. Veerkamp, C.R. Staples, E.E. Connor, Z. Wang, M.D. Hanigan, R.J. Tempelman, and K.A. Weigel  2017. Use of genotype × environment interaction model to accommodate genetic heterogeneity for residual feed intake, dry matter intake, net energy in milk, and metabolic body weight in dairy cattle. Journal of Dairy Science 100, 2007-2016. doi: 10.3168/jds.2016-11606.

 Mmongoyo, J.A., F. Wu, J.E. Linz, M.G. Nair, J.K. Mugula, R.J. Tempelman and G.M. Strasburg 2017. Aflatoxin levels in sunflower seeds and cakes collected from micro- and small-scale sunflower oil processors in Tanzania. PLOS One 12(4), e0175801. doi: 10.1371/journal.pone.0175801

 Mota, R.R., B.P. Sollero, P.S. Lopes, R.J. Tempelman, I. Aguilar, and F. F. Cardoso 2017.  Analyses of Reaction Norms Reveal New Chromosome Regions Associated with Tick Resistance in Cattle.  Animal July 13, 1-10. doi: 10.1017/S1751731117001562.

 Chen, C., J.P. Steibel, and R.J. Tempelman 2017. Genome wide association analyses based on broadly different specifications for prior distributions, genomic windows, and estimation methods. Genetics 206, 1791-1806. doi: 10.1534/genetics.117.202259

08/17/2018

Workshops:

Guilherme Rosa taught a short course on “Quantitative Genetics and Prediction of Complex Traits” (co-taught with Dr. Dan Gianola) at the China Agricultural University, Beijing, China. October 18-22, 2017.

 Guilherme Rosa taught a short course on “Statistical Modeling in Animal Breeding and Genetics” at Sao Paulo State University (UNESP), Jaboticabal, Brazil. November 6-10, 2017.

 Nora Bello taught a workshop on an “Introduction to structural equation modeling for production systems in animal agriculture” at the Department of Agronomy and Department of Economics and Statistics, National University of Cordoba, Argentina. December 22, 2017.

 Rob Tempelman taught an “Introduction to SAS” workshop for the MSU Center for Statistical Training and Consulting. February 9, 2018.

 Walt Stroup taught a three workshop on generalized linear mixed models at the Finnish Natural Resources Institute. March, 2018.

 Alex Lipka taught a series of three workshops entitled “GWAS to identify targets for MAS”, “Implementing genomic selection”, and “Comparing GS to MAS” at the African Plant Breeding Academy, Class III, Session 3, World Agroforestry Centre, Nairobi, Kenya. May 17-19, 2018.

 Guilherme Rosa taught a 1-day workshop on “Introduction to Graphical Modeling for Agricultural Data” at the 30th Conference on Applied Statistics in Agriculture, Kansas State University, Manhattan, KS. May 6, 2018.

 Bruce Craig led a day-long workshop titled “An Overview of Linear Mixed Models” as part of the 9th International Purdue Symposium on Statistics. June 5, 2018.

 Guilherme Rosa taught a short course on “Quantitative Genetics” (co-taught with Dr. Bruce Walsh) at the 23rd Summer Institute in Statistical Genetics, University of Washington, Seattle, WA. July 16-18, 2018.

 Guilherme Rosa taught a short course on “Mixed Models in Quantitative Genetics” (co-taught with Dr. Bruce Walsh) at the 23rd Summer Institute in Statistical Genetics, University of Washington, Seattle, WA. July 18-20, 2018.

 Kathy Yeater presented a training workshop entitled “Learning the Essential Steps to Non-Gaussian Data Analysis” to the USDA Biosciences Research Laboratory, Insect Genetics and Biochemistry Research Unit, Fargo, ND.  July 16-17, 2018.

 Nora Bello taught a workshop on “Application of general and generalized linear mixed models for experimental design and data analysis of research problems in animal health and production” at a Summer Workshop on Mixed Models, Kansas State University. Sponsored by Shell U.S. August 7-8, 2018.

 Books:

Glaz, B. and K.M. Yeater (ed.) 2018. Applied Statistics in Agricultural, Biological, and Environmental Sciences. ASA, CSSA, and SSSA, Madison, WI. doi: 10.2134/appliedstatistics

 Dixon, P.M., K.J. Moore, and E. van Santen. 2018. The Analysis of Combined Experiments. In Applied Statistics in Agricultural, Biological, and Environmental Sciences. Glaz and Yeater (ed.). pp 201-234. ASA, CSSA, and SSSA, Madison, WI. doi: 10.2134/appliedstatistics.2016.0004

 Burgueno, J., J. Crossa, F. Rodriguez, and K.M. Yeater. 2018. Augmented Designs-Experimental Designs in which all Treatments are Not Replicated. In Applied Statistics in Agricultural, Biological, and Environmental Sciences. Glaz and Yeater (ed.) pp 345-370. ASA, CSSA, and SSSA, Madison, WI. doi: 10.2134/appliedstatistics.2016.0005

 Yeater, K.M. and M.B. Villamil. 2018. Multivariate Methods for Agricultural Research. In Applied Statistics in Agricultural, Biological, and Environmental Sciences. Glaz and Yeater (ed.). pp 371-400. ASA, CSSA, and SSSA, Madison, WI. doi: 10.2134/appliedstatistics.2015.0083

 Stroup, W.W. 2018. Analysis of Non-Gaussian Data. In Applied Statistics in Agricultural, Biological, and Environmental Sciences. Glaz and Yeater (ed.) pp 449-510. ASA, CSSA, and SSSA, Madison, WI. doi:10.2134/appliedstatistics.2015.0081

 Presentations:

Bello, N.M. Searching for causal networks in experimental data: a swine application. Biometry Seminar, Dept. of Statistics, University of Wisconsin – Madison. April 27, 2018. (Invited)

 Bello, N.M. Exploring biological relationships between reproductive outcomes in a swine production system. Department of Agronomy and Department of Economics and Statistics, National University of Cordoba, Argentina. December 22, 2017. (Invited)

 Bello, N.M. Data architecture and related considerations for big data analytics. USDA National Animal Genome Research Program (NAGRP) Meeting on Livestock High-Throughput Phenotyping and Big Data Analytics, Beltsville, Maryland. November 13-14, 2017. (Invited)

 Bello, N.M. Statistical principles for reproducible research in the Animal Sciences. Department Seminar Series, Department of Animal Sciences, University of Wisconsin – Madison. September 26th, 2017. (Invited)

 Tempelman, R.J. Using genetic relationships to improve the design and analysis of animal science studies. Midwestern section of the American Society of Animal Science. March 13, 2018. (Invited)

 Lipka A.E. Quantification of Non-Additive Genomic Contribution towards Food and Energy-related Crop Traits. 9th International Purdue Symposium on Statistics. June 7, 2018. (Invited)      

Lipka A.E. Quantification of the Genomic Contribution towards Food and Energy-related Crop Traits. Bioinformatics Seminar, Department of Statistics, Purdue University. April 10, 2018. (Invited)

 Lipka A.E. Quantification of the Genomic Contribution towards Food and Energy-related Crop Traits. Spring Seminar Series, Interdisciplinary Plant Group, University of Missouri. April 2, 2018. (Invited)

 Lipka A.E. Quantification of the Genomic Contribution towards Food and Energy-related Crop Traits at the Data Driven Crop Design Technology workshop, Kyushu University, Japan. February 20, 2018. (Invited)

 Shenstone, E. and Lipka A.E. Genome Wide Association Study for Binomially Distributed Traits: A Case Study for Stalk Lodging in Maize. Genomes to Fields G2F Collaborator’s Meeting, Chicago. December 5, 2017. (Invited)

 Rosa, G.J.M. Leveraging on High-Throughput Phenotyping Technologies to Optimize Livestock Genetic Improvement and Husbandry. 69th Annual Meeting of the European Federation of Animal Science (EAAP). Dubrovnik, Croacia, August 27-31, 2018. (Invited)

 Rosa, G.J.M. Harnessing Operational Farm Data to Enhance Advancement of Agricultural Sciences. 63rd Annual Meeting of the Brazilian Region (RBRAS) of the International Biometric Society, Curitiba, Brazil, May 23-25, 2018. (Invited)

 Rosa, G.J.M. Harnessing Operational Farm Data to Enhance Advancement of Agricultural Sciences. KSU Conference on Applied Statistics in Agriculture, Manhattan, KS. May 07-08, 2018. (Invited)

 Rosa, G.J.M. Modeling Networks for Prediction and Causal Inference in Quantitative Genetics and Genomics. Symposium on Genomic Prediction. Beijing, China, October 17, 2017. (Invited)

 Chitakasempornkul, K., A. Jager, N. M. Bello. Hierarchical Bayesian structural equation modeling of heterogeneous relationships between performance outcomes in animal production systems. International Biometrics Conference. Barcelona, Spain. July 8-13, 2018.

 Johnson, L.C., M. Galliart, N. M. Bello, J. Polland, P. St Amand, M. Knapp, B. Maricle, S. Baer. Experimental natural selection of big bluestem grass ecotypes across the Great Plains’ climate gradient. Population, Evolutionary and Quantitative Genetics Conference PEQG18. Madison, WI. May 13-17. 2018.

 Chitakasempornkul, K., M. B. Menegat, M. A. D. Goncalves, S. S. Dritz, A. Jager, M. D. Tokach, R. D. Goodband, N. M. Bello. Exploring causal biological relationships between reproductive traits in high-performing gilts and sows. Midwest Meetings of the American Society of Animal Sciences. Omaha, NE. March 12-14, 2018.

 Shawk, D. J., K. N. Nemechek, R. D. Goodband, J. C. Woodworth, M. D. Tokach, S. S. Dritz,  Chitakasempornkulgs, N. M. Bello and J. M. DeRouchey. Effect of increasing chloride concentration on 7 to 12 kg nursery pig growth performance. Midwest Meetings of the American Society of Animal Sciences. Omaha, NE. March 12-14, 2018.

 Wu, F., M. D. Tokach, J. M. DeRouchey, S. S. Dritz, J. C. Woodworth, R. D. Goodband, K. Capp, S. Remfry, K. Chitakasempornkul, N. M. Bello, T. G. Nagaraja, R. G. Amachawadi. Effects of tylosin administration route on the development of antimicrobial resistance in fecal enterococci of finishing swine. Midwest Meetings of the American Society of Animal Sciences. Omaha, NE. March 12-14, 2018.

 Sharpe, S., L. Johnson, N. M. Bello, O. Parrish and M. Galliart. Rapid evolution in a contaminated environment: evolutionary response of native grass Andropogon virginicus to heavy metals in an abandoned mine site. Annual Conference of the oSTEM professional society (Out in Science, Technology, Engineering and Mathematics). Chicago, IL. November 16-18, 2017.

 Rankin, A. J., T. O. Schermerhorn, K. S. KuKanich, N. M. Bello, J. A. S. Huey, K. A. Fentiman and J. A. Meekins. The effects of ophthalmic prednisolone and diclofenac on diabetes mellitus regulation in dogs.  American College of Veterinary Ophthalmologists Conference. Baltimore, MD. October 11-14, 2017.

 Murphy, M., D. Hodgson, N. M. Bello. On accuracy and precision of oxygen flow meters. International Veterinary Emergency and Critical Care Symposium. September 13-17, 2017. Nashville, TN.

Macchiavelli, R. Oportunidades de Investigación en Biometría. VI Reunión Iberoamericana de Biometría. Quito, Ecuador, November 15-17, 2017.

 Madden, L. V. Is disease intensity a good surrogate for yield loss or toxin contamination? A case study with Fusarium head blight of wheat using surrogacy models. The 12th International Epidemiology Workshop. Lillehammer, Norway. June 10-14, 2018.

 Yeater, K.M. What is a GLMM? And, how do I analyze it? USDA Northern Crop Science Laboratory, Fargo, ND. March 28, 2018.

 Yeater, K.M. Best Practices for Data Spreadsheet Organization. USDA Biosciences Research Laboratory, Insect Genetics and Biochemistry Research Unit, Fargo, ND. July 16, 2018.

 Yeater, K.M. Introduction to JMP. USDA Biosciences Research Laboratory, Insect Genetics and Biochemistry Research Unit, Fargo, ND. July 18, 2018.

 Torres, P.; Macchiavelli, R.; Teran, L, Chavarria Carvajal, J. Semi-parametric mixed beta regression model for disease severity in plants. XXIX International Biometric Conference, Barcelona, Spain, July 9-13, 2018.

 Alhojaily, S., Stott, R., Rutigliano, H., Stevens, J.R., and Isom, S.C. Effects of lactation and negative energy balance on endometrial expression of selected transcripts of Holstein dairy cows at day 7 post-ovulation.  Annual meeting of the American Society of Animal Science, Vancouver, Canada, July 2018.

 Publications:

Leone, C. M., Dharmasena, M., Tang, C., DiCaprio, E., Ma, Y., Araud, E., Bolinger, H., Rupprom, K., Yeargin, T., Li, J., Schaffner, D., Jiang, X. Sharp, J. L., Vinje, J., and Fraser, A. 2018. Prevalence of human noroviruses in commercial food establishment bathrooms. Journal of Food Protection, 81(5): 719-728.

 Vernon, K.L., Cloy, S., Boone, L.H., Coverdale, J.A., Jenkins, T. C., and Sharp, J. L. 2017. Dietary supplementation of conjugated linoleic acid in horses: establishment of baseline values on bone turnover, synovial prostaglandin E2, and gait kinematics. Comparative Exercise Physiology, 13 (2): 71-78.

 Mikhailova, E., Hagan, D., Sharp, J. L., Ritter, B., Stiglitz, R., Mealing, V., Allerton, T., Burdette, K., and Solomons, A. 2017. Landscape, soil and plant analysis of Japanese stiltgrass (Microstegium vimineum) invasion in Piedmont region, SC. Communications in Soil Science and Plant Analysis, 48 (9): 1068-1077.  0.1080/00103624.2017.1323099

 Bello, N. M., V. C. Ferreira, D. Gianola and G. J. M. Rosa. 2018. Invited review: Conceptual framework for investigating causal effects from observational data in livestock. Journal of Animal Science. In press.

 Bello, N. M. and D. Renter. 2018. Invited review: Reproducible research from noisy data: revisiting key statistical principles for the animal sciences Journal of Dairy Science 101 (7):1-23.

 Lamsal, A., S. Welch, J. White, K. Thorp and N. M. Bello. 2018. Estimating Parametric Phenotypes that Determine Anthesis Date in Zea mays: Challenges in Combining Ecophysiological Models with Genetics. PLoS One 13(4): e0195841.

 Murphy, M.L., D. S. Hodgson and N. M. Bello. 2018. On accuracy and precision of oxygen therapy flowmeters in a veterinary teaching hospital. Veterinary Anaesthesia and Analgesia 45(1): 41-47.

 Goncalves, M. A. D., M. D. Tokach, S. S. Dritz, N. M. Bello, K. J. Touchette, R. D. Goodband, J. M. DeRouchey and J. C. Woodworth. 2018. Standardized ileal digestible valine:lysine dose-response effects in 25- to 45- kg pigs under commercial conditions. Journal of Animal Science 96(2): 591-599.

 Cha, E., M. Sanderson, D. Renter, N. Cernicchiaro, A. Jager and N. M. Bello. 2017. Implementing structural equation models to observational data from feedlot production systems. Preventive Veterinary Medicine 147: 163-171.

 Ekong, P.S., N. M. Bello, L. W. Noll, N. Cernicchiaro, D. G. Renter, J. Bai, T. G. Nagaraja and M. W. Sanderson. 2017. Bayesian estimation of true prevalence, sensitivity and specificity of three diagnostic tests for detection of Escherichia coli O157 in cattle feces. Preventive Veterinary Medicine 148: 21-27.

 Goncalves, M. A. D., M. D. Tokach, N. M. Bello, K. J. Touchette, R. D. Goodband, J. M. DeRouchey, J. C. Woodworth and S. S. Dritz. 2017. Dose-response evaluation of the standardized ileal digestible tryptophan:lysine ratio to maximize growth performance of growing-finishing gilts under commercial conditions. Animal. doi:10.1017/S1751731117002968.

 Clark, A. B., M. D. Tokach, J. M. DeRouchey, S. S. Dritz, R. D. Goodband, J. C. Woodworth, K. J. Touchette and N. M. Bello. 2017. Modeling the effects of standardized ileal digestible isoleucine to lysine ratio on growth performance of nursery pigs. Translational Animal Science doi:10.2527/tas2017.0048.

 Clark, A. B., M. D. Tokach, J. M. DeRouchey, S. S. Dritz, R. D. Goodband, J. C. Woodworth, K. J. Touchette and N. M. Bello. 2017. Modeling the effects of standardized ileal digestible valine to lysine ratio on growth performance of nursery pigs. Translational Animal Science. doi:10.2527/tas2017.0049

 Fissekis, S., D. S. Hodgson and N. M. Bello. 2017. Effect of cleaning on accuracy and precision of oxygen flow meters on anesthetic machines of various ages. Veterinary Anaesthesia and Analgesia. http://dx.doi.org/10.1016/j.vaa.2016.10.002.

 Delph, K., E. G. Davis, N. M. Bello, K. Hankins, M. J. Wilkerson, C. Ewen. 2017. Comparison of immunologic responses following intranasal and oral administration of a USDA-approved, live-attenuated Streptococcus equi vaccine. Journal of Equine Veterinary Science. doi: 10.1016/j.jevs.2016.08.015

 Hardie, L.C., M. J. Vandehaar, R.J. Tempelman, K.A. Weigel, L.E. Armentano, G. Wiggans, R.F. Veerkamp, Y. deHaas, M. Coffey, E.E. Connor, M.D. Hanigan, C.R. Staples, Z. Wang, J.C.M Dekkers, and D.M. Spurlock.  2017.  The genetic and biological basis of feed efficiency in mid-lactation Holstein dairy cows.  Journal of Dairy Science 100:9061-9075.

 de Souza, R.A, R.J. Tempelman, M.S. Allen, W.P. Weiss, J.K. Bernard, and M.J. Vandehaar. 2018. Predicting nutrient digestibility in high producing lactating dairy cows. Journal of Dairy Science 101: 1123-1135.

 Toledo-Alvarado, H., A.I. Vazquez, G. de los Campos, R.J. Tempelman, G. Bittante, and A. Cecchinato. 2018.  Diagnosing pregnancy status using infrared spectra and milk composition in dairy cows. Journal of Dairy Science 101:2496-2505.

 Lu, Y., M.J. Vandehaar, D.M. Spurlock, K.A. Weigel, L.E. Armentano, E.E. Connor, M. Coffey,R.F. Veerkamp, Y. de Haas, C.R. Staples, Z. Wang, M.D. Hanigan, and R.J. Tempelman. 2018.  Genome wide association analyses based on a multiple trait approach for modeling feed efficiency.  Journal of Dairy Science 101:3140-3154.

 Zhou, Y., E.E. Connor, G.R. Wiggans, Y. Lu, R.J. Tempelman, S.G. Schroeder, H. Chen, and G.F. Liu. 2018. Genome-wide copy number variant analysis reveals variants associated with 10 diverse production traits in Holstein cattle.  BMC Genomics 19:314.

 Regmi, P., C.I. Robison, D.R. Jones, R.K. Gast, R.J. Tempelman, and D.M. Karcher. 2018.  Effects of different litter substrates and induced molt on production performance and welfare quality parameters of white Leghorn hens housed in multi-tiered aviary system.  Poultry Science. doi.org/10.3382/ps/pey211.

 Vanous A, Gardner C, Blanco M, Martin-Schwarze A, Lipka AE, Flint-Garcia S, Bohn M,  Edwards J, and Lübberstedt T. 2018. Association Mapping of Flowering and Height Traits in Germplasm Enhancement of Maize Doubled Haploid (GEM-DH) Lines. The Plant Genome.

 Fenton ME, Owens BF, Lipka AE, Ortiz D, Tiede T, Mateos-Hernandez M, Ferruzzi MG, and Rocheford T. 2018. High-density linkage mapping of vitamin E content in maize grain. Molecular Breeding 38(3):31.

 Diepenbrock CH, Kandianis CB, Lipka AE, Magallanes-Lundback M, Vaillancourt B, Góngora-Castillo E, Wallace JG, Cepela J, Mesberg A, Bradbury P, Ilut DC, Mateos-Hernandez M, Hamilton J, Owens BF, Tiede T, Buckler ES, Rocheford T, Buell CR, Gore MA, and DellaPenna D. 2017. Novel Loci Underlie Natural Variation in Vitamin E Levels in Maize Grain. The Plant Cell Online: tpc-00475.

 Ding Yezhang, Huffaker A, Köllner TG, Weckwerth P, Robert CAM, Spencer JL, Lipka AE, and Schmelz EA. 2017. Selinene volatiles are essential precursors for maize defense promoting fungal pathogen resistance. Plant Physiology: pp-00879.

 Dong H, Liu S, Clark LV, Sharma S, Gifford JM, Juvik JA, Lipka AE, and Sacks EJ. 2017. Genetic mapping of biomass yield in three interconnected Miscanthus populations. GCB Bioenergy.

 Hu S, Sanchez DL, Wang C, Lipka AE, Yin Y, Gardner CA and Lübberstedt T. 2017. Brassinosteroid and Gibberellin control of seedling traits in maize (Zea mays L.). Plant Science.

 Feldman MJ, Paul RE, Banan D, Barrett JF, Sebastian J, Yee MC, Jiang H, Lipka AE, Brutnell TP, Dinneny JR, Leakey AD. 2017. Time dependent genetic analysis links field and controlled environment phenotypes in the model C4 grass Setaria. PLoS Genetics 13(6):e1006841.

 Hu S, Wang C, Sanchez  DL, Lipka AE, Liu P, Yin Y, M Blanco, and Lübberstedt T. 2017. Gibberellins promote brassinosteroids action and both increase heterosis for plant height in maize (Zea mays L.). Frontiers in Plant Science 8:1039.

 Dórea, J. R. R., Rosa, G. J. M., Weld, K. A. and Armentano, L. E. 2018. Mining data from milk infrared spectroscopy to improve feed intake predictions in lactating dairy cows. Journal of Dairy Science 101(7): 5878-5889.

 Wang, Y., Mi, X., Rosa, G. J. M., Chen, Z., Lin, P., Wang, S. and Bao, Z. 2018. Technical note: an R package for fitting sparse neural networks with application in animal breeding. Journal of Animal Science 96: 2016-2026.

 Lopes, F. B., Wu, X.-L., Li, H., Xu, J., Perkins, T., Genho, J., Ferretti, R., Tait Jr. R. G., Bauck, S. and Rosa, G. J. M. 2018. Improving accuracy of genomic prediction in Brangus cattle by adding animals with imputed low-density SNP genotypes. Journal of Animal Breeding and Genetics 135:14-27.

 Ramos, S. B., Caetano, S. L., Rosa, G. J. M., Savegnago, R. P., Kern, E. L., Bernardes, P. A., Lôbo, R. B. and Munari, D. P. 2018. Estimation of genetic parameters for cow age at last calving under different censorship criteria. Livestock Science 208: 40-43.

 Amiri Roudbar, M., Abdollahi-Arpanahi, R., Ayatollahi Mehrgardi, A., Mohammadabadi, M., Taheri Yeganeh, A. and Rosa, G. J. M. 2018. Estimation of the variance due to parent-of-origin effects for productive and reproductive traits in Lori-Bakhtiari sheep. Small Ruminant Research 160: 95-102.

 Huang, X., Elston, R. C., Rosa, G. J. M., Mayer, J., Ye, Z., Kitchner, T., Brilliant, M. H., Page, D. and Hebbring, S. J. 2018. Applying family analyses to electronic health records to facilitate genetic research. Bioinformatics 34(4): 635-642.

 Dadousis, C., Pegolo, S., Rosa, G. J. M., Bittante, G., Cecchinato, A. 2017. Genome-wide association and pathway-based analysis using latent variables related to milk protein composition and cheesemaking traits in dairy cattle. Journal of Dairy Science 100: 9085-9102.

 Ferreira, V. C., Thomas, D. L., Valente, B. D. and Rosa, G. J. M. 2017. Causal effect of prolificacy on milk yield in dairy sheep using propensity score. Journal of Dairy Science 100: 8443–8450.

 Töpner, K., Rosa, G. J. M., Gianola, D. and Schön, C.-C. 2017. Bayesian networks illustrate genomic and residual trait connections in maize (Zea mays L.). G3-Genes Genomes Genetics 7:2779-2789.

 Caetano, S. L., Rosa, G. J. M., Savegnago, R. P., Ramos, S. B., Bernardes, P. A., Bezerra, L. A. F., Lôbo, R. B., Paz, C. C. P. and Munari, D. P. 2017. Estimation of genetic parameters for longevity considering the cow’s age at last calving. Journal of Genetics 58:103-109.

 Cieniewicz, E. J., Pethybridge, S. J., Gorny, A., Madden, L. V., McLane H., Perry, K. L., and Fuchs, M. 2017. Spatiotemporal spread of grapevine red blotch-associated virus in a California vineyard. Virus Research 241: 156-162.

 Cordova, L. G., Madden, L. V., Amiri, A., Schnabel, G., and Peres, N. A. 2017. Meta-analysis of a web-based disease forecast system for control of anthracnose and Botrytis fruit rots of strawberry in southeastern United States. Plant Disease 101: 1910-1917.

 Ojiambo, P.S., Yuen, J., van den Bosch, F., and Madden, L.V. 2017. Epidemiology: Past, present, and future impacts on understanding disease dynamics and improving plant disease management—a summary of Focus Issues articles. Phytopathology 107: 1092-1094.

 Savary, S., Djurle, A., Yuen, J., Ficke, A., Rossi, V., Esker, P.D., Fernandes, M. C., Del Ponte, E. M., Kumar, J., Madden, L. V., Paul, P., McRoberts, N., Singh, P. K., Huber, L., Pope de Vallavielle, C., Saint-Jean, S., and Willocquet, L. 2017. A white paper on global wheat health based on scenario development and analysis. Phytopathology 107:  1109-1122.

 Conrad, A. O., McPherson, B. A., Wood, D. L., Madden, L. V., and Bonello, P. 2017. Constitutive phenolic biomarkers identify naïve Quercus agrifolia resistant to Phytophthora ramorum, the causal agent of sudden oak death. Tree Physiology 37: 1686-1696.

 Jeger, M. J., Madden, L. V., and van den Bosch, F. 2018. Plant virus epidemiology: Applications and prospects for mathematical modeling and analysis to improve understanding and disease control. Plant Disease 102: 837-854.

 Madden, L. V., Hughes, G., Bucker Moraes, W., Xu, X.-M., and Turechek, W. W. 2018. Twenty-five years of the binary power law for characterizing heterogeneity of disease incidence. Phytopathology 108: 656-680.

 Piepho, H.-P., Madden, L. V., Roger, J., Payne, R., and Williams, E. R. 2018. Estimating the variance for heterogeneity in arm-based network meta-analysis. Pharmaceutical Statistics 17: 264-277.

 Thomason, J.E., M.C. Savin, K.R. Brye and E.E. Gbur 2017. Native earthworm population dominance after seven years of tillage, burning, and residue level management in a wheat-soybean double crop system. Applied Soil Ecology, 120, 211-218.

 Brye, K.R., C.W. Rogers, A.D. Smartt, R.J. Norman, J.T. Hardke and E.E. Gbur 2017. Methane emissions as affected by crop rotation and rice cultivar in the Lower Mississippi River Valley, USA. Geodermal Regional, 11, 8-17.

 Sharpley, A.N., B.E. Haggard, L. Berry, J. Burke, K. Brye, M.D. Daniels, E. Gbur, T. Glover, T. Kresse, P. Hays and K.W. VanDevender 2017. Nutrient concentrations in Big Creek correlate to regional watershed land use. Agricultural & Environmental Letters. doi: 10.2134/ael2017.08.0027.

 Fournier, A.M.V., D.C. Mengel, E.E. Gbur and D.G. Krementz 2017. The timing of Autumn Sora (Porzana carolina) migration in Missouri. The Wilson Journal of Ornithology, 129, 765-770.

 Adams, T.C., K.R. Brye, M.C. Savin, J.A. Lee and E.E. Gbur 2017. Microbial carbon substrate utilization differences among high and average yield soybean areas. Agriculture, 7(6), 48. doi: 10.3390/agriculture760048.

 Bourland, F.M. and E.E. Gbur 2017. Relationships of plant trichomes to yield and fiber quality parameters in upland cotton. Journal of Cotton Science 21, 296-305.

 Xing, X.Y., M. Popp, P. Chen, P. Manjarrez-Sandoval and E. Gbur 2018. Evaluation of high oil and high protein soybean using component pricing. Journal of Crop Improvement. doi: 10.1080/15427528.2017.1414722 .

 Martin, S.M., J.K. Norsworthy, R.C. Scott, J. Hardke, G.M. Lorenz and E.Gbur 2018. Effect of thiamethoxam on injurious herbicides in rice. Advances in Crop Science and Technology, 6(2). doi:10.4172/2329-8863.1000351.

 Adams, T.C., K.R. Brye, L.C. Purcell, J. Ross, E.E. Gbur  and M.C. Savin 2018. Physiological plant response differences among high and average yield soybean areas in Arkansas. Crop, Forage, and Turf Management. doi:10.2134/cfm2017.07.0047.

 Nayduch, D., K. Zurek, J.L. Thomson, and K.M. Yeater.  2018. Effects of bacterial dose and fly sex on persistence and excretion of Salmonella enterica serovar Typhimiurium from adult house flies (Musca domestica L.; Diptera: Muscidae).  J. Medical Entomology, tjy055, doi.org/10.1093/jme/tjy055

 Brabec, D., M. Perez-Fajardo, H. Dogan, K. Yeater, and E. Maghirang.  2018.  Effectiveness of modified 1-hour air-oven moisture methods for determining popcorn moisture.  Applied Engineering in Agriculture. 34(3):617-621. doi: 10.13031/aea.12621.

 Funk, P., C. Armijo, D. Whitelock, M., Pelletier, J. Wanjura, G. Holt, R. Hardin IV, C. Delhom, and K. Yeater.  2018.  Accuracy of alternate oven drying procedures. In Proceedings of the National Cotton Council Beltwide Cotton Conference.  San Antonio, TX.

 Parsa, S, V Ortiz, MI Gómez-Jiménez, M Kramer, FE Vega.  2018.  Root environment is a key determinant of fungal entomopathogen endophytism following seed treatment in the common bean, Phaseolus vulgaris.  Biological Control 116: 74–81.

 Wright, BN, Bailey, RL, Craig, BA, Mattes, RD, McCormack, L, Stluka, S, Franzen-Castle, L, Henne, B, Mehrle, D, Remley, D, and Eicher-Miller, HA. 2018.  Daily Dietary Intake Patterns Improve after Visiting a Food Pantry among Food-Insecure Rural Midwestern Adults, Nutrients, 10(5), 583.

 Adelsperger, AR, Phillips, EH, Ibriga, HS, Craig, BA, Green, LA, Murphy, MP, and Goergen, CJ. 2018.  Development and growth trends in angiotensin II-induced murine dissecting abdominal aortic aneurysms, Physiological Reports, 6(8), e13668.

 DePalma, G and Craig, BA. 2018. Bayesian monotonic errors-in-variables models with applications to pathogen susceptibility testing, Statistics in Medicine, 37(3), 487.

 Mischler, RA, Armah, SM, Craig, BA, Rosen, AD, Banerjee, A, Selzer, DJ, Choi, JN, and Gletsu-Miller, N. 2018.  Comparison of Oral Iron Supplement Formulations for Normalization of Iron Status Following Roux-EN-y Gastric Bypass Surgery: A Randomized Trial, Obesity Surgery, 28(2), 369

 Torres, Norma, Xue Yu, Ingrid Y. Padilla, Raul E. Macchiavelli, Reza Ghasemizadeh, David Kaeli, Jose F. Cordero, John D. Meeker, Akram N. Alshawabkeh 2018. The influence of hydrogeological and anthropogenic variables on phthalate contamination in eogenetic karst groundwater systems. Environmental Pollution 237:298-307.

 Bishop, M.O., Stevens, J.R., and Isom, S.C. Statistical methods for assessing individual oocyte viability through gene expression profiles.  Proceedings of the Kansas State University Conference on Applied Statistics in Agriculture, 2017.

 Saunders, G., Fu, G. and Stevens, J.R. 2017. A Bivariate Hypothesis Testing Approach for Mapping the Trait-Influential Gene. Scientific Reports 7: 12798.

 Pillai, S.M., Hoffman, M.L., Jones, A.K., McFadden, K.K., Stevens, J.R., Zinn, S.A., Reed, S.A., and Govoni, K.E. 2017. Poor maternal nutrition during gestation alters muscle gene expression in fetal offspring.  Journal of Animal Science 95(suppl4): 150-150.

 Stevens, J.R., Jones, T.R., Lefevre, M., Ganesan, B., and Weimer, B.C. 2017. SigTree: a microbial community analysis tool to identify and visualize significantly responsive branches in a phylogenetic tree. Computational and Structural Biotechnology Journal 15: 372-378.

 Buckland KR, Reeve JR, Creech JE, and Durham SL. 2018. Managing soil fertility and health for quinoa production and weed control in organic systems. Soil & Tillage Research 184: 52-61. doi.org/10.1016/j.still.2018.07.001

 Heroy KY, St. Clair SB, Burritt EA, Durham SL, and Villalba JJ. 2018. Nutritional state and secondary compounds influence trembling aspen (Populus tremuloides) intake by lambs. Applied Animal Behaviour Science.  doi.org/10.1016/j.applanim.2018.05.031

 Ryan MP, Neuman-Lee LA, Durham SL, Smith GD, and French SS. 2018. A sex-dependent change in behavioral temperature regulation in African house snakes (Lamprophis fuliginosus) challenged with different pathogens. Journal of Thermal Biology 73: 8-13. doi:10.1016/j.jtherbio.2018.02.001

 Portman ZM, Tepedino VJ, Tripodi AD, Szalanski AL, and Durham SL. 2018. Local extinction of a rare plant pollinator in Southern Utah (USA) associated with invasion by Africanized honey bees. Biological Invasions 20(3): 593-606. doi:10.1007/s10530-017-1559-1

 Other project related activities:

Larry Madden maintains a website with statistical software code (SAS) and PowerPoint presentations on a range of data-analytic subjects. The material is based heavily on previously presented workshops. The address is https://u.osu.edu/agstatworkshops/

08/09/2019

Chitakasempornku, K., M.B. Menegat, G.J.M. Rosa, F.B. Lopes, A. Jager, M.A.D. Goncalves, S.S. Dritz, M.D. Tokach, R.D. Goodband, N.M. Bello (2019). Investigating causal biological relationships between reproductive traits in high-performing gilts and sows. Journal of Animal Science 97(6): 2385-2401. DOI: 10.1093/jas/skz1

Li, Y., R.A. Cloyd and N.M. Bello (2019). Effect of integrating the entomopathogenic fungus, Beauveria bassiana and the rove beetle Dalotia coriaria in suppressing western flower thrips, Frankliniella occidentalis populations under greenhouse conditions. Journal of Economic Entomology.  doi.org/10.1093/jee/toz132

Li, Y., R.A. Cloyd and N.M. Bello (2019). Effect of insecticide drench applications on western flower thrips, Frankliniella occidentalis, pupae in the growing medium. HortScience 54(5): 890-895. doi.org/10.21273/HORTSCI13892-19

Passafaro, T., D. Van de Stroet, N.M. Bello and G.J.M. Rosa (2019). Generalized additive mixed modeling of total transport losses of market-weight pigs. Journal of Animal Science 97(5): 2025-2034. doi.org/10.1093/jas/skz087

Oliveira, R.C., K.J. Sailer, H.T. Holdorf, C.R. Seely, R.S. Pralle, M.B. Hall, N.M. Bello and H.M.White  (2019). The effect of fermented ammoniated condensed whey supplementation on lactation performance and metabolic health in transition dairy cows. Journal of Dairy Science 102(3): 2283-2297. doi.org/10.3168/jds.2018-15519.

***Selected as Editor’s choice for the March Issue of the Journal of Dairy Science

Wu, F., M.D. Tokach, J.M. DeRouchey, S.S. Dritz, J.C. Woodworth, R.D. Goodband, K. Capps, S. Remfry, K. Chitakasempornkul, N.M. Bello, T.G. Nagaraja and R.G. Amachawadi (2019). Effects of tylosin administration routes on the prevalence of antimicrobial resistance among fecal enterococci of finishing swine. Foodborne Pathogens and Disease. doi.org/10.1089/fpd.2018.2551

Galliart, M., N.M. Bello, M. Knapp, J. Poland, P. St. Amand, S. Baer, B. Maricle, A.B. Smith and L. Johnson. (2019). Local adaptation, genetic divergence, and experimental selection in a foundation grass across the US Great Plains’ climate gradient. Global Change Biology 25: 850-868. doi.org/10.1111/gcb.14534

Chen, R.; N.M. Bello; M.W. Becker and L. Bix. (2018). Chasing red herrings: Can visual distracters extend the time children take to open child resistant vials? PLOS ONE 13(12): e0207738. doi.org/10.1371/journal.pone.0207738

Chitakasempornkul, K., E. Cha, D. Renter, M. Sanderson, A. Jager, and N.M. Bello (2018). Accounting for data architecture in structural equation modeling of feedlot performance outcomes. Journal of Agricultural, Biological and Environmental Statistics 23(4): 529-549. doi.org/10.1007/s13253-018-0336-7.

Ekong, P.S., M.W. Sanderson, P.B. Shridhar, N. Cernicchiaro, D.G. Renter, N.M. Bello, J. Bai and T.G. Nagaraja (2018). Bayesian estimation of sensitivity and specificity of culture- and PCR-based methods for the detection of the six major non-O157 Escherichia coli serogroups in cattle feces. Preventive Veterinary Medicine 161: 90-99. doi: 10.1016/j.prevetmed.2018.10.012

Bello, N.M., V.C. Ferreira, D. Gianola and G. J. M. Rosa (2018). Invited review: Conceptual framework for investigating causal effects from observational data in livestock. Journal of Animal Science 96(10): 4045-4062. doi: 10.1093/jas/sky277.

Bello, N.M. and D. Renter (2018). Invited review: Reproducible research from noisy data - revisiting key statistical principles for the animal sciences. Journal of Dairy Science 101(7):1-23. doi: 10.3168/jds.2017-13978

Lamsal, A., S. Welch, J. White, K. Thorp and N.M. Bello (2018). Estimating Parametric Phenotypes that Determine Anthesis Date in Zea mays: Challenges in Combining Ecophysiological Models with Genetics. PLoS One 13(4): e0195841.

Murphy, M.L., D.S. Hodgson and N.M. Bello (2018). On accuracy and precision of oxygen therapy flowmeters in a veterinary teaching hospital. Veterinary Anaesthesia and Analgesia 45(1): 41-47.

Goncalves, M.A.D., M.D. Tokach, S.S. Dritz, N.M. Bello, K. J. Touchette, R. D. Goodband, J. M. DeRouchey and J. C. Woodworth (2018). Standardized ideal digestible valine:lysine dose-response effects in 25- to 45- kg pigs under commercial conditions. Journal of Animal Science 96(2): 591-599. doi: 10.1093/jas/skx059.

Williams, H.E., M.D. Tokach, S.S. Dritz, J.C. Woodworth, J.M. DeRouchey, T.G. Nagaraja, R.D. Goodband, K. Chitakasempornkul, N.M. Bello and R.G. Amachawadi (2018). Effects of chlortetracycline alone or in combination with probiotics on nursery pig growth performance and antimicrobial susceptibility of fecal Escherichia coli. Journal of Animal Science doi: 10.1093/jas/sky370.

Goncalves, M.A.D., M.D. Tokach, N.M. Bello, K.J. Touchette, R.D. Goodband, J.M. DeRouchey, J.C. Woodworth and S.S. Dritz (2018). Dose-response evaluation of the standardized ideal digestible tryptophan:lysine ratio to maximize growth performance of growing-finishing gilts under commercial conditions. Animal 12(7):1380-1387. doi: 10.1017/S1751731117002968.

Delph, K., E.G. Davis, N.M. Bello, K. Hankins, M.J. Wilkerson, C. Ewen (2018). Comparison of immunologic responses following intranasal and oral administration of a USDA-approved, live-attenuated Streptococcus equi vaccine. Journal of Equine Veterinary Science 60:29-34. doi: 10.1016/j.jevs.2016.08.015

Lalman, D. L., C. E. Andresen, C. L. Goad, L. Kriese-Anderson, M. E. King, K. G. Odde (2019). Weaning weight trends in the US beef cattle industry. Applied Animal Science 35(1): 57-65.

Akehi K, BC Long, C Goad, and A Cody (2018). Pulsed shortwave diathermy and moist heat pack application on musculotendinous stiffness and hysteresis during passive ankle motion. Athl Train Sports Health Care 10(1):31-40.

Cobb, Adam B., Gail W. T. Wilson, Carla Goad, Michael A. Grusak (2018). Influence of alternative soil amendments on mycorrhizal fungi and cowpea production. Heliyon 4(7):e00704. DOI: 10.1016/j.heliyon.2018.e00704.

Dunn, Bruce, Hardeep Singh, Carla Goad, (2018). Relationship between chlorophyll meter readings and nitrogen in poinsettia leaves, Journal of Plant Nutrition 41(12): 1-10. DOI: 10.1080/01904167.2018.1459697.

Haviland, C. L., Chris J. Richards, J. A. Reed, M. E. Youngers, S. T. Quanz, C. G. Lockard, M. A. Woolsoncroft, T. C. Husz, Carla Goad, T. A. Jackson, D. L. Step, M. Corbin, Clint R. Krehbiel (2018). Growth, performance, and carcass characteristics of feedlot Holstein steers fed ractopamine hydrochloride. Journal of Animal Science 96 (suppl_2): 80-81.

Swearengin, Lance, Bruce Dunn, Hardeep Singh, Carla Goad (2018). Evaluation of a mobile phone plant nitrogen recommendation application in the greenhouse, Journal of Plant Nutrition, DOI: 10.1080/01904167.2018.1510519.

Panthi, R., Kelly, A., McMahon, D.J., Dai, X., Vollmer, A., and Sheehan, J. (2019). Response surface methodology modeling of protein concentration, coagulum cut size, and set temperature on curd moisture loss kinetics during curd stirring. Journal of Dairy Science, 102 (6): 4989-5004.  

Wang, Y. X., Li, L. Q., Sun, Y. P., and Dai, X. (2019). Relative salt tolerance of Seven Japanese Spirea cultivars. HortTechnology, 29 (3): 367–373. Stewart, E. K., Beauchemin, K. A., Dai, X., MacAdam, J.W., and Villalba, J. J. (2019). Effect of tannin-containing hays on enteric methane emissions and nitrogen partitioning in beef cattle. Journal of Animal Science, 97(8): 3286-3299.

Krombeen, S. K., Shankar, V., Noorai, R. E., Saski, C. A., Sharp, J. L., Wilson, M. E. (2019).  The identification of differentially expressed genes between extremes of placental efficiency in maternal line gilts on day 95 of gestations. BMC Genomics, 20 (1): 254-269.

Gredell, D., Schroeder, A. R., Belk, K., Broeckling, C., Heuberger, A., Kim, S.Y., King, D. A., Shackelford, S. D., Sharp, J. L., Wheeler, T. L., Woerner, D. R., and Prenni, J. (2019).  Comparison of machine learning algorithms for predictive modeling of beef attributes using Rapid Evaporative Ionization Mass Spectrometry (REIMS) data. Scientific Reports, 9: 5721.

Krombeen, S. K., Shankar, V., Noorai, R. E., Saski, C. A., Sharp, J. L., Wilson, M. E. (2019). The identification of differentially expressed genes between extremes of placental efficiency in maternal line gilts on day 95 of gestations. BMC Genomics, 20 (1): 254-269.

Funk, P.A., A.A. Terrazas, K.M. Yeater, R.G. Hardin IV, C.B. Armijo, D.Pl. Whitelock, M.G. Pelletier, J.D. Wanjura, G.A. Holt, and C.D. Delhom  (2018). Procedures for Moisture Analytical Tests Used in Cotton Ginning Research. Transactions of the ASABE. 61(6): 1985-1995.  https://doi.org/10.13031/trans.12980

Halvorson, J.J., D.W. Archer, M.A. Liebig, K.M. Yeater, and D.L. Tanaka (2019). Impacts of intensified cropping systems on soil water use by spring wheat. Soil Sci. Soc. Am. J. doi:10.2136/sssaj2018.09.0349

Mehus, A.A., A.M. Dickey, T.P.L. Smith, K.M. Yeater, and M.J. Picklo (2019). Next-Generation Sequencing Identifies Polyunsaturated Fatty Acid Responsive Genes in the Juvenile Rat Cerebellum. Nutrients 11(2), 407; https://doi.org/10.3390/nu11020407

Yocum, G., J. Rinehart, A. Rajamohan, J. Bowsher, K. Yeater, and K. Greenlee (2019). Thermoprofile parameters affect survival of Megachile rotundata during exposure to low-temperatures. Integrative & Comparative Biology, doi.org/10.1093/icb/icz126.

Wolfe, B., R. Macchiavelli, S. Van Bloem (2019). Seed rain along a gradient of degradation in Caribbean dry forest: Effect of dispersal limitation on the trajectory of forest recovery. Applied Vegetation Science DOI: 10.1111/avsc.1244

Kaler, A.S., J.D. Ray, W.T. Schapaugh, A.R. Asebedo, C.A. King, E.E. Gbur and L.C. Purcell (2018). Association mapping identifies loci for canopy temperature under drought in diverse soybean genotypes. Euphytica, 214, 135-152. doi.org/10.1007/s10681-018-2215-2.

Rector, C., K.R. Brye, R.J. Norman, J. Humphreys, E.E. Gbur, C. Willett, M.A. Evans-White and J. Hardke (2018). NO2 emmisions and global warming potential as affected by water management and rice cultivar on an Alfisol in Arkansas, USA. Geoderma Regional, 14, Article e00170.

Humphreys, J., K.R. Brye, C. Rector, R.J. Norman, E.E. Gbur and J. Hardke (2018). Water management and cultivar effects on methane emissions from direct-seeded, delayed-flood rice production in Arkansas. Journal of Rice Research and Developments, 1, 14-24.

Rector, C., K.R. Brye, J. Humphreys, R.J. Norman, N.A. Slaton, E.E. Gbur, C. Willett and M.A. Evans-White (2018). Tillage and coated-urea effects on nitrous oxide emissions from direct-seeded, delayed-flood rice production in Arkansas. Journal of Rice Research and Developments, 1, 25-37.

Greub, C.E., T.L. Roberts, N.A. Slaton, J.P. Kelly and E.E. Gbur (2018). Evaluating late-season tissue tests to improve nitrogen management in furrow irrigated mid-south corn production. Agronomy Journal, 110, 1580-1588.

Suhartono, M.C. Savin and E.E. Gbur (2018). Transmissible plasmids and integrons shift Escherichia coli population towards larger multiple drug resistance numbers. Microbial Drug Resistance, 24, 244-252.

Martin, S.M., J.K. Norsworthy, R.C. Scott, J. Hardke, G.M. Lorenz and E.Gbur (2019). Influence of a thiamethoxam seed treatment on acetolactate synthase-inhibiting herbicide induced injury to inbred and hybrid imidazolinone-resistant rice. Weed Technology, 33, 253-257.

Desrochers, J., K.R. Brye, E. Gbur, M. Savin, and E. Pollock (2019). Long term residue and water management practice effects on particulate organic matter in a loessial soil in eastern Arkansas. Geoderma, 337, 792-804. doi.org/10.1016/j.geoderma.2018.10.027.

da Silva, M.P., M. Klepadlo, E.E. Gbur, A. Pereira, R.E. Mason, J.R. Rupe, B.H. Bluhm, L. Wood, L.A. Mozzoni and P. Chen (2019). QTL mapping of charcoal rot resistance in PI 567562A soybean accession. Crop Science, 59(2). doi:10.2135/cropsci2018.02.0145.

Desrochers, J., K.R. Brye, E. Gbur, and E. Mason (2019). Long term residue and water management effects on infiltration in a wheat-soybean system on a loessial soil in eastern Arkansas. Geoderma Regional, doi.org/10.1016/j.geodrs.2019.e00203.

da Silva, M., A. Pereira, J. Rupe, B. Bluhm, E. Gbur, L. Wood, L. Mazzoni, and P. Chen (2019). Effectiveness of a seed plate assay for evaluating charcoal rot resistance in soybean and relationship to field performance. Plant Disease. doi.org/10.1094/PDIS-10-18-19-RE.

Fournier, A.M.V., D.C. Mengel, E. Gbur, A. Raedeke and D.G. Krementz (2019). Evaluating tradeoffs in the response of Sora (Porzana carolina) and waterfowl to the timing of early autumn wetland inundation. Waterbirds, 42, 168-178.

Folgelman, M., J.K. Norsworthy, T. Barber and E. Gbur (2019). Influence of formulation and rate on rice tolerance to early season applications of Acethlor. Weed Technology, 33, 239-245.

Jones, G.T., J.K. Norsworthy, T. Barber, E. Gbur and G.R. Kruger (2019). Off-target movement of DGA and BAPMA dicamba to sensitive soybean. Weed Technology, 33, 51-65.

Jones, G.T., J.K. Norsworthy, T. Barber, E. Gbur and G.R. Kruger (2019). Effect of low doses of dicamb alone and in combination with glyphosate on parent soybean and offspring. Weed Technology, 33, 17-23.

Norsworthy, J.K., M. Fogelman, T. Barber and E. Gbur (2019). Evaluation of acetochlor-containing herbicide programs in imidazolinone- and quizalofol-resistant rece. Crop Protection, 122, 98-105.

Duree, T.J., K.R. Brye, L.S. Wood, D.M. Miller and E.E. Gbur (2019). Soil moisture regime and mound position effects on soil profile properties in a native tallgrass prairie in northwest Arkansas, USA. Geoderma, 352, 49-60.

Cordova L.G., Ellis, M.A., Wilson, L.L., Madden, L.V., and Peres, N.A. (2018). Evaluation of the Florida strawberry advisory system for control of Botrytis and anthracnose fruit rots in Ohio. Plant Health Progress 19: 182-187.

Paul, P.A., Bradley, C.A., Madden, L.V., Dalla Lana, F., Bergstrom, G.C, Dill-Macky, R., Esker, P.D., Wise, K.A., McMullen, M., Grybauskas, A., Kirk, W.W., Milus, E., and Ruden, K. (2018). Meta-analysis of the effects of QoI and DMI fungicide combinations on Fusarium head blight and deoxynivalenol in wheat. Plant Disease 102: 2602-2615.

Paul, P.A., Bradley, C.A., Madden, L.V., Dalla Lana, F., Bergstrom, G.C, Dill-Macky, R., Wise, K.A., Esker, P.D., McMullen, M., Grybauskas, A., Kirk, W.W., Milus, E., and Ruden, K. (2018). Effects of pre- and post-anthesis applications of demethylation inhibitor fungicides on Fusarium head blight and deoxynivalenol in spring and winter wheat. Plant Disease 102: 2500-2510.

Piepho, H.-P., Madden, L.V., and Williams, E.R. (2018). Contribution to the discussion of the paper by Jackson and White: Using general-purpose GLMM software for meta-analysis. Biometrical Journal 60: 1059-1061.

Shah, D.A., De Wolf, E.D., Paul, P.A., and Madden, L.V. (2019). Functional data analysis of weather variables linked to Fusarium head blight epidemics in the United States. Phytopathology 109: 96-110.

Paul, P.A., Salgado, J.D., Bergstrom, G.C., Bradley, C., Byamukama, E., Byrne, A.M., Chapara, V., Cummings, J.A., Chilvers, M.I., Dill-Macky, R., Friskop, A.J. Kleczewski, N.M., Madden, L.V., Nagelkirk, M., Stevens, J., Smith, M., Wegulo, S.N., Wise, K.A., Yabwalo, D. (2019). Integrated effects of genetic resistance and prothioconazole + tebuconazole application timing on Fusarium head blight in wheat. Plant Disease 103: 223-237.

Shah, D.A., Paul, P.A., De Wolf, E.D., and Madden, L.V. (2018). Predicting plant disease epidemics from functionally-represented weather series. Philosophical Transactions of the Royal Society B 374: 20180273.

Kramer M. (2019).  Stats: How useful is the treatment?  Nature 569, 192.

Kesoju S.R., Greene S.L., Martin R.C., Kramer M., Walsh D.B. and Boydston R.A. (2019). Isolation distances for transgenic alfalfa seed production in the Pacific Northwest. Crop Science 59: 1701-1708.

Kramer, M.  (2018). Using the posterior predictive distribution as a diagnostic tool for mixed models.  Proceedings from Joint Statistics Meeting, Biometrics Section 448-466.

Ebbets, A., Lane, D., Dixon, P.M., Hollweg, T., Huisenga, M., and Gurevitch, J. (2019).  Using meta-analysis to develop evidence-based recovery trajectories of vegetation and soils in restored wetlands in the Northern Gulf of Mexico.  Estuaries and Coasts. doi.org/10.1007/s12237-019-00536-y

Griebel, S., Webb, M.W., Campaneela, O.H., Craig, B.A., Weil, C.F., and Tuinstra, M.R. (2019). The alkali spreading phenotype in Sorghum bicolor and its relationship to starch gelatinization, Journal of Cereal Science, 86, 41–47.

Aiken, V, C.F., Dórea, J.R.R., Acedo, J.S., Sousa, F.G., Dias, F.G. and Rosa, G.J.M. (2019). Record linkage for farm-level data analytics: Comparison of deterministic, stochastic and machine learning methods. Computers and Electronics in Agriculture 163: 104857.

Goto, T., Fernandes, A.F.A., Tsudzuki, M., Rosa, G.J.M. (2019). Causal phenotypic networks for egg traits in an F2 chicken population. Molecular Genetics and Genomics. doi.org/10.1007/s00438-019-01588-2

Fernandes, A.F.A., Dorea, J.R.R., Fitzgerald, R., Herring, W. and Rosa, G.J.M. (2019). A novel automated system to acquire biometric and morphological measurements, and predict body weight of pigs via 3D computer vision. Journal of Animal Science 97: 496-508.

Abdalla, E.A., Lopes, F.B., Byrem, T.M., Weigel, K.A. and Rosa, G.J.M. (2019). Genomic prediction of bovine leukosis incidence in a US Holstein population. Livestock Science 225: 73–77.

Bresolin, T., Rosa, G.J.M., Valente, B.D., Espigolan, R., Gordo, D.G.M., Braz, C.U., Fernandes, G.A., Magalhães, A.F.B., Garcia, D.A., Frezarim, G.B., Leão, G.F.C., Carvalheiro, R., Baldi, F., Oliveira H.N. and Albuquerque, L.G. (2019). Effect of quality control, density and allele frequency of markers on the accuracy of genomic prediction for complex traits in Nellore cattle. Animal Production Science 59(1): 48-54.

Momen, M., Mehrgardi, A.A., Sheikhi, A., Kranis, A., Tusell, L., Morota, G., Rosa, G.J.M. and Gianola, D. (2018). Predictive ability of genome-assisted statistical models under various forms of gene action. Scientific Reports 8:12309.

Baker, L.A., Rosa, G.J.M., Hao, Z., Piazza, A., Hoffman, C., Binversie, E.E., Sample, S.J. and Muir, P. (2018). Multivariate genome-wide association analysis identifies novel and relevant variants associated with anterior cruciate ligament rupture risk in the dog model. BMC Genetics 19:39.

Momen, M., Mehrgardi, A.A., Amiri Roudbar, M., Kranis, A., Pinto, R.M., Valente, B.D., Morota, G., Rosa, G.J.M. and Gianola, D. (2018). Including phenotypic causal networks in genome-wide association studies using mixed effects structural equation models. Frontiers in Genetics, 9:455.

Diers, B.W., Specht, J., Rainey, K.M., Cregan, P., Song, Q., Ramasubramanian, V., Graef, G., Nelson, R., Schapaugh, W., Wang, D., Shannon, G., McHale, L., Kantartzi. S., Xavier, A., Mian, R., Stupar, R.M., Michno, J.M., An, Y.Q.C., Goettel, W., Ward, R., Fox, C., Lipka, A.E., Hyten, H., Cary, T. and Beavis, W.D. (2018). Genetic architecture of soybean yield and agronomic traits. G3: Genes, Genomes, Genetics 8: 3367-3375.

Shenstone, E., Cooper, J., Rice, B., Bohn, M., Jamann, T.M., and Lipka, A.E. (2018). An assessment of the performance of the logistic mixed model for analyzing binary traits in maize and sorghum diversity panels. PLoS ONE 13: e0207752.

Dong, H., Liu. S., Clark, L.V., Sharma, S., Gifford, J.M., Juvik,.J.A., Lipka, A.E., and Sacks, E.J. (2018). Winter hardiness of miscanthus (II): genetic mapping for overwintering ability and adaptation traits in three interconnected Miscanthus populations. GCB Bioenergy. DOI: 10.1111/gcbb.12587.

Mastrodomenico, A.T., Bohn, M.O., Lipka, A.E., and Below, F.E (2019). Genomic selection using maize ex-plant variety protection germplasm for the prediction of nitrogen-use traits. Crop Science 58: 1-19.

Chen, A.H., Ge, W., Metcalf, W., Jakobsson, E., Mainzer, L.S., and Lipka, A.E. (2019). An assessment of true and false positive detection rates of stepwise epistatic model selection as a function of sample size and number of markers. Heredity 122: 660-671.

Clark, L.V., Lipka, A.E., and Sacks, E.J. (2019). polyRAD: genotype calling with uncertainty from sequencing data in polyploids and diploids. G3: Genes, Genomes, Genetics 9: 663-673.

Rice, B., and Lipka, A.E. (2019). Evaluation of RR-BLUP genomic selection models that   incorporate peak genome-wide association study signals in maize and sorghum. The Plant Genome 12.

Cooper, J., Rice, B., Shenstone, E., Lipka, A.E., and Jamann, T.M. (2019). Genome-wide analysis and prediction of resistance to Goss’ wilt in maize. The Plant Genome. DOI: 10.3835/plantgenome2018.06.0045.

Clark, L.V., Dwiyanti, M.S., Anzoua, K.G., Brummer, J.E., Ghimire, B.K., Głowacka, K., Hall, M., Heo, K., Jin, X., Lipka, A.E., Peng, J., Yamada, T., Yoo, J.H., Yu, Cy, Zhao, H., Long, S.P., and Sacks, E.J. (2019). Biomass yield in a genetically diverse Miscanthus sinensis germplasm panel evaluated at five locations revealed individuals with exceptional potential. GCB Bioenergy. DOI: 10.1111/gcbb.12606.

Clavijo-Herrera, J., Edzard van Santen, and Celina Gómez (2018). Growth, Water-Use Efficiency, Stomatal Conductance, and Nitrogen Uptake of Two Lettuce Cultivars Grown under Different Percentages of Blue and Red Light.  Horticulturae 2018, 4, 16; doi: 10.3390/horticulturae4030016.

Chinchilla, S. Luigi G. Izzo, Edzard van Santen, and Celina Gómez (2018).  Growth and Physiological Responses of Lettuce Grown under Pre-Dawn or End-of-Day Sole-Source Light-Quality Treatments. Horticulturae 2018, 4, 8; doi: 10.3390/horticulturae4020008

Wang, L.P., D. Rowland, X.P. Yang, Edzard van Santen, B. Tillman and J.P. Wang (2018). Mild Water Deficit in the Field Down Regulated Drought Responsive Genes in Peanut Leaf Tissues. International Journal of Agriculture and Biology 20: 1152-1160. doi:10.17957/ijab/15.0633.

Rouquette, F.M., Edzard van Santen and G.R. Smith (2018). Long-Term Forage and Cow-Calf Relationships for Bermudagrass Overseeded with Arrowleaf Clover or Annual Ryegrass Managed at Different Stocking Rates. Crop Science 58: 1426-1439. doi: 10.2135/cropsci2017.12.0736.

Lin, Y., D.B. Watts, Edzard van Santen, and G. Cao (2018). Influence of Poultry Litter on Crop Productivity under Different Field Conditions: A Meta-Analysis. Agronomy Journal 110:807-818. doi:10.2134/agronj2017.09.0513

Rovere, G., G. de los Campos, R.J. Tempelman, A.I. Vazquez, F. Miglior, F. Schenkel, A. Cecchinato, G. Bittante, H. Toledo-Alvarado, and A. Fleming (2018).  A landscape of the heritability of Fourier-Transform infrared spectral wavelengths of milk samples by parity and lactation stage in Holstein cows.  Journal of Dairy Science 102:1354-1363.

Channaiah, Lakshmikantha H, Minto Michael, Jennifer C. Acuff, Randall K. Phebus, Harshavardhan Thippareddi, and George Milliken (2019). Evaluation of thermal inactivation parameters of Salmonella in whole wheat multigrain bread. Food Microbiology 82: 334-341.

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